Aliases for ENSG00000277324 Gene

Subcategory (RNA class) for ENSG00000277324 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for ENSG00000277324 Gene

  • Novel Transcript, Antisense To POLI 5
  • AC093462.1 5
  • Lnc-MBD2-7 165

External Ids for ENSG00000277324 Gene

Summaries for ENSG00000277324 Gene

GeneCards Summary for ENSG00000277324 Gene

ENSG00000277324 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000277324 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000277324 Gene

Genomics for ENSG00000277324 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000277324 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J054268 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 +0.2 163 3 SP1 CREB1 GATAD2A CTCF ATF7 TEAD4 PRDM10 REST ZNF629 RFX1 POLI ENSG00000277324 C18orf54
GH18J054259 Enhancer 1 FANTOM5 ENCODE 0.4 +8.9 8857 3.5 SP1 BACH1 RELA IKZF2 PKNOX1 EED ARID3A DPF2 RELB EGR1 lnc-POLI-1 POLI MBD2 SNORA37 C18orf54 ENSG00000277324
GH18J054264 Enhancer 0.8 ENCODE 0.4 +5.7 5737 0.2 BACH1 FOXA1 STAT3 RELA TCF12 IKZF2 TRIM22 ELK1 DPF2 RELB MBD2 SNORA37 C18orf54 lnc-POLI-1 ENSG00000277324 POLI
GH18J054257 Enhancer 0.6 ENCODE dbSUPER 0.4 +11.9 11892 1.3 TEAD4 CEBPA CEBPB NR2F6 POLI MBD2 SNORA37 C18orf54 STARD6 lnc-POLI-1 MG828559 ENSG00000277324
GH18J054278 Enhancer 0.4 Ensembl 0.4 -8.6 -8638 1.4 SPI1 BATF CEBPB HLF POLI ENSG00000277324 NONHSAG023893.2 C18orf54
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000277324 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000277324 Gene

Genomic Locations for ENSG00000277324 Gene
chr18:54,256,429-54,270,063
(GRCh38/hg38)
Size:
13,635 bases
Orientation:
Minus strand

Genomic View for ENSG00000277324 Gene

Genes around ENSG00000277324 on UCSC Golden Path with GeneCards custom track
ENSG00000277324 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000277324 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000277324 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000277324 Gene

Proteins for ENSG00000277324 Gene

Post-translational modifications for ENSG00000277324 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000277324 Gene

Domains & Families for ENSG00000277324 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000277324 Gene

Function for ENSG00000277324 Gene

Phenotypes From GWAS Catalog for ENSG00000277324 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000277324 Gene

Localization for ENSG00000277324 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000277324 Gene

Pathways & Interactions for ENSG00000277324 Gene

PathCards logo

SuperPathways for ENSG00000277324 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000277324 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000277324 Gene

Drugs & Compounds for ENSG00000277324 Gene

No Compound Related Data Available

Transcripts for ENSG00000277324 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000277324 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00007631F3_9606 lncRNA 1683 2

Ensembl: ENST00000621167 (view in UCSC) ,

LNCipedia: lnc-MBD2-7:1,

URS0000D589CC_9606 lncRNA 4745 1

LNCipedia: lnc-MBD2-7:3,

URS0000D57FF4_9606 lncRNA 2836 1

LNCipedia: lnc-MBD2-7:2,

URS0000D57737_9606 lncRNA 789 1

LNCipedia: lnc-MBD2-7:4,

ENSG00000277324 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000277324 Gene

No ASD Table

Relevant External Links for ENSG00000277324 Gene

GeneLoc Exon Structure for
ENSG00000277324

No data available for mRNA/cDNA for ENSG00000277324 Gene

Expression for ENSG00000277324 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000277324 Gene

Orthologs for ENSG00000277324 Gene

Evolution for ENSG00000277324 Gene

ENSEMBL:
Gene Tree for ENSG00000277324 (if available)
TreeFam:
Gene Tree for ENSG00000277324 (if available)

No data available for Orthologs for ENSG00000277324 Gene

Paralogs for ENSG00000277324 Gene

No data available for Paralogs for ENSG00000277324 Gene

Variants for ENSG00000277324 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000277324 Gene

Disorders for ENSG00000277324 Gene

No disorders were found for ENSG00000277324 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000277324 Gene

Publications for ENSG00000277324 Gene

No publications were found for ENSG00000277324 Gene.

No data available for Mastermind for ENSG00000277324 Gene

Products for ENSG00000277324 Gene

Sources for ENSG00000277324 Gene