Aliases for ENSG00000277283 Gene

Subcategory (RNA class) for ENSG00000277283 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000277283 Gene

  • Novel Transcript, Antisense To RAB35 5
  • NONHSAG012499.2 91
  • HSALNG0094493 164
  • Lnc-BICDL1-1 165
  • AC004812.2 5

External Ids for ENSG00000277283 Gene

Summaries for ENSG00000277283 Gene

GeneCards Summary for ENSG00000277283 Gene

ENSG00000277283 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000277283 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000277283 Gene

Genomics for ENSG00000277283 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000277283 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J120115 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 +2.0 1992 7.8 BRCA1 SP1 GATAD2A PRDM10 TFE3 SOX13 IKZF1 KDM1A ZNF692 POLR2A RAB35 ENSG00000277283 GCN1 RPL31P52 PXN-AS1 RPLP0 SRSF9 PXN PRKAB1 COQ5
GH12J120109 Enhancer 0.9 ENCODE dbSUPER 0.4 -6.0 -6022 2.2 ZIC2 IKZF2 EED DPF2 RELB RUNX3 GATAD2B NFE2 ZNF316 ZKSCAN1 ENSG00000277283 RAB35 lnc-GCN1-3 BICDL1 RF00017-1304
GH12J120099 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -15.4 -15435 4.7 SCRT2 EED RUNX3 RBM22 NR2F2 IKZF1 SPI1 MNT POLR2A CTCF RAB35 GCN1 PRKAB1 BICDL1 COQ5 MLEC lnc-GCN1-3 ENSG00000277283 RF00017-1304
GH12J120104 Enhancer 0.6 Ensembl ENCODE dbSUPER 0.4 -11.9 -11904 1.4 TCF7L2 RAB35 GCN1 BICDL1 lnc-GCN1-3 ENSG00000277283 RF00017-1304
GH12J120106 Enhancer 0.2 ENCODE 0.4 -10.5 -10495 0.2 lnc-GCN1-3 RAB35 ENSG00000277283 BICDL1 RF00017-1304
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000277283 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000277283 Gene

Genomic Locations for ENSG00000277283 Gene
chr12:120,116,907-120,123,568
(GRCh38/hg38)
Size:
6,662 bases
Orientation:
Plus strand

Genomic View for ENSG00000277283 Gene

Genes around ENSG00000277283 on UCSC Golden Path with GeneCards custom track
ENSG00000277283 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000277283 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000277283 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000277283 Gene

Proteins for ENSG00000277283 Gene

Post-translational modifications for ENSG00000277283 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000277283 Gene

Domains & Families for ENSG00000277283 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000277283 Gene

Function for ENSG00000277283 Gene

Phenotypes From GWAS Catalog for ENSG00000277283 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000277283 Gene

Localization for ENSG00000277283 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000277283 Gene

Pathways & Interactions for ENSG00000277283 Gene

PathCards logo

SuperPathways for ENSG00000277283 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000277283 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000277283 Gene

Drugs & Compounds for ENSG00000277283 Gene

No Compound Related Data Available

Transcripts for ENSG00000277283 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000277283 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000787272_9606 lncRNA 2094 3

Ensembl: ENST00000611079 (view in UCSC) ,

LncBook: HSALNT0195896,

LNCipedia: lnc-BICDL1-1:2,

URS00008BAD4C_9606 lncRNA 2090 2

LNCipedia: lnc-BICDL1-1:1,

NONCODE: NONHSAT031106.2,

URS0000D5771F_9606 lncRNA 6643 1

LNCipedia: lnc-BICDL1-1:6,

URS0000D59123_9606 lncRNA 2371 1

LNCipedia: lnc-BICDL1-1:5,

URS0000D57C5C_9606 lncRNA 2036 1

LNCipedia: lnc-BICDL1-1:3,

ENSG00000277283 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000277283 Gene

No ASD Table

Relevant External Links for ENSG00000277283 Gene

GeneLoc Exon Structure for
ENSG00000277283

No data available for mRNA/cDNA for ENSG00000277283 Gene

Expression for ENSG00000277283 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000277283 Gene

Orthologs for ENSG00000277283 Gene

Evolution for ENSG00000277283 Gene

ENSEMBL:
Gene Tree for ENSG00000277283 (if available)
TreeFam:
Gene Tree for ENSG00000277283 (if available)

No data available for Orthologs for ENSG00000277283 Gene

Paralogs for ENSG00000277283 Gene

No data available for Paralogs for ENSG00000277283 Gene

Variants for ENSG00000277283 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000277283 Gene

Disorders for ENSG00000277283 Gene

No disorders were found for ENSG00000277283 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000277283 Gene

Publications for ENSG00000277283 Gene

No publications were found for ENSG00000277283 Gene.

No data available for Mastermind for ENSG00000277283 Gene

Products for ENSG00000277283 Gene

Sources for ENSG00000277283 Gene