Aliases for ENSG00000276850 Gene

Subcategory (RNA class) for ENSG00000276850 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000276850 Gene

  • Novel Transcript 5
  • NONHSAG005838.2 91
  • Lnc-FAM25C-31 165
  • HSALNG0077804 164
  • AC245041.2 5

External Ids for ENSG00000276850 Gene

Additional External Ids for ENSG00000276850 Gene

Summaries for ENSG00000276850 Gene

GeneCards Summary for ENSG00000276850 Gene

ENSG00000276850 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000276850 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000276850 Gene

Genomics for ENSG00000276850 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000276850 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J047990 Promoter/Enhancer 1.1 EPDnew Ensembl ENCODE 0.4 +6.1 6060 2.2 CEBPB SIN3A FOXA1 KLF1 SREBF1 SP1 ANXA8 piR-52986-002 ENSG00000276850 NPY4R2
GH10J047988 Promoter/Enhancer 0.7 Ensembl ENCODE 0.4 +8.5 8454 1.9 PRDM10 SIN3A EGR2 piR-52986-002 ANXA8 ENSG00000276850 NPY4R2
GH10J047987 Promoter 0.3 Ensembl 0.4 +9.9 9941 0.4 piR-52986-002 ANXA8 ENSG00000276850 ENSG00000273760 NPY4R2
GH10J047984 Promoter 0.3 Ensembl 0.4 +11.4 11441 2.2 piR-52986-002 ANXA8 ENSG00000273760 ENSG00000276850 NPY4R2
GH10J047994 Enhancer 0.2 Ensembl 0.7 +3.5 3542 1.6 AGAP12P ANXA8 ENSG00000276850 FAM25C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000276850 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000276850 Gene

Genomic Locations for ENSG00000276850 Gene
chr10:47,908,064-47,997,742
(GRCh38/hg38)
Size:
89,679 bases
Orientation:
Minus strand

Genomic View for ENSG00000276850 Gene

Genes around ENSG00000276850 on UCSC Golden Path with GeneCards custom track
ENSG00000276850 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000276850 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000276850 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000276850 Gene

Proteins for ENSG00000276850 Gene

Post-translational modifications for ENSG00000276850 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000276850 Gene

Domains & Families for ENSG00000276850 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000276850 Gene

Function for ENSG00000276850 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000276850 Gene

Localization for ENSG00000276850 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000276850 Gene

Pathways & Interactions for ENSG00000276850 Gene

PathCards logo

SuperPathways for ENSG00000276850 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000276850 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000276850 Gene

Drugs & Compounds for ENSG00000276850 Gene

No Compound Related Data Available

Transcripts for ENSG00000276850 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000276850 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00007744B5_9606 lncRNA 1962 3

Ensembl: ENST00000610809 (view in UCSC) , ENST00000672835 (view in UCSC) ,

LNCipedia: lnc-FAM25C-31:2,

NONCODE: NONHSAT156984.1,

URS0000766C83_9606 lncRNA 376 3

Ensembl: ENST00000479781 (view in UCSC) , ENST00000672015 (view in UCSC) ,

LNCipedia: lnc-FAM25C-31:4,

NONCODE: NONHSAT156981.1,

URS000075F3A4_9606 lncRNA 372 3

Ensembl: ENST00000618306 (view in UCSC) , ENST00000671786 (view in UCSC) ,

LNCipedia: lnc-FAM25C-31:6,

NONCODE: NONHSAT156982.1,

URS0000766247_9606 lncRNA 493 2

Ensembl: ENST00000613389 (view in UCSC) , ENST00000671710 (view in UCSC) ,

LNCipedia: lnc-FAM25C-31:7,

URS0000EF3D96_9606 lncRNA 1993 1

Ensembl: ENST00000668134 (view in UCSC) , ENST00000673132 (view in UCSC) ,

ENSG00000276850 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000276850 Gene

No ASD Table

Relevant External Links for ENSG00000276850 Gene

GeneLoc Exon Structure for
ENSG00000276850

No data available for mRNA/cDNA for ENSG00000276850 Gene

Expression for ENSG00000276850 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000276850 Gene

Orthologs for ENSG00000276850 Gene

Evolution for ENSG00000276850 Gene

ENSEMBL:
Gene Tree for ENSG00000276850 (if available)
TreeFam:
Gene Tree for ENSG00000276850 (if available)

No data available for Orthologs for ENSG00000276850 Gene

Paralogs for ENSG00000276850 Gene

No data available for Paralogs for ENSG00000276850 Gene

Variants for ENSG00000276850 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000276850 Gene

Disorders for ENSG00000276850 Gene

Additional Disease Information for ENSG00000276850

No disorders were found for ENSG00000276850 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000276850 Gene

Publications for ENSG00000276850 Gene

No publications were found for ENSG00000276850 Gene.

No data available for Mastermind for ENSG00000276850 Gene

Products for ENSG00000276850 Gene

Sources for ENSG00000276850 Gene