Aliases for ENSG00000276675 Gene

Data sources for ENSG00000276675 Gene:

Subcategory (RNA class) for ENSG00000276675 Gene

misc_RNA

Aliases for ENSG00000276675 Gene

External Ids for ENSG00000276675 Gene

Summaries for ENSG00000276675 Gene

GeneCards Summary for ENSG00000276675 Gene

ENSG00000276675 is an RNA Gene, and is affiliated with the misc_RNA class.

Rfam classification for ENSG00000276675 Gene

  • TTC28 antisense RNA 1 conserved region 4

Additional gene information for ENSG00000276675 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000276675 Gene

Genomics for ENSG00000276675 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000276675 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J028002 Enhancer 0.3 Ensembl 250.7 +0.5 534 1.2 CEBPB CTCF ENSG00000276675 piR-40408 TTC28-AS1 lnc-PITPNB-6 PITPNB TTC28
GH22J028019 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 0.4 +17.8 17770 3.3 CTCF ZIC2 SIN3A REST SMC3 RAD21 KLF9 YY1 MAZ PKNOX1 TTC28-AS1 lnc-PITPNB-6 ENSG00000276675 PITPNB TTC28
GH22J028008 Enhancer 0.8 Ensembl ENCODE 0.4 +6.9 6901 1.3 CTCF SIN3A REST TRIM22 SMC3 RAD21 BHLHE40 ZNF2 ZFP37 ZNF189 TTC28-AS1 PITPNB TTC28 ENSG00000276675 lnc-PITPNB-6
GH22J028014 Enhancer 0.5 Ensembl 0.4 +13.5 13517 2.8 PRDM6 RCOR1 GATA2 POLR2A CHD2 RAD21 EP300 TTC28-AS1 TTC28 lnc-PITPNB-6 ENSG00000276675 PITPNB
GH22J028022 Enhancer 0.2 Ensembl 0.4 +19.7 19717 0.4 lnc-PITPNB-6 ENSG00000276675 PITPNB TTC28
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000276675 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000276675 Gene

Latest Assembly
chr22:28,002,484-28,002,595
(GRCh38/hg38)
Size:
112 bases
Orientation:
Plus strand

Genomic View for ENSG00000276675 Gene

Genes around ENSG00000276675 on UCSC Golden Path with GeneCards custom track
ENSG00000276675 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000276675 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000276675 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000276675 Gene

Proteins for ENSG00000276675 Gene

Post-translational modifications for ENSG00000276675 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000276675 Gene

Domains & Families for ENSG00000276675 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000276675 Gene

Function for ENSG00000276675 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000276675 Gene

Localization for ENSG00000276675 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000276675 Gene

Pathways & Interactions for ENSG00000276675 Gene

PathCards logo

SuperPathways for ENSG00000276675 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000276675 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000276675 Gene

Drugs & Compounds for ENSG00000276675 Gene

No Compound Related Data Available

Transcripts for ENSG00000276675 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000276675 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000070F031_9606 misc_RNA 112 1

Ensembl: ENST00000619378 (view in UCSC) ,

ENSG00000276675 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000276675 Gene

No ASD Table

Relevant External Links for ENSG00000276675 Gene

GeneLoc Exon Structure for
ENSG00000276675

No data available for mRNA/cDNA for ENSG00000276675 Gene

Expression for ENSG00000276675 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000276675 Gene

Orthologs for ENSG00000276675 Gene

Evolution for ENSG00000276675 Gene

ENSEMBL:
Gene Tree for ENSG00000276675 (if available)
TreeFam:
Gene Tree for ENSG00000276675 (if available)

No data available for Orthologs for ENSG00000276675 Gene

Paralogs for ENSG00000276675 Gene

No data available for Paralogs for ENSG00000276675 Gene

Variants for ENSG00000276675 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000276675 Gene

Disorders for ENSG00000276675 Gene

No disorders were found for ENSG00000276675 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000276675 Gene

Publications for ENSG00000276675 Gene

No publications were found for ENSG00000276675 Gene.

No data available for Mastermind for ENSG00000276675 Gene

Products for ENSG00000276675 Gene

Sources for ENSG00000276675 Gene