Aliases for ENSG00000276054 Gene

Subcategory (RNA class) for ENSG00000276054 Gene

lncRNA

Number of RNA Genes sources:

1 / 14

Aliases for ENSG00000276054 Gene

  • Novel Transcript, Sense Intronic To C17orf78 5
  • Lnc-TADA2A-2 168
  • AC243654.3 5

External Ids for ENSG00000276054 Gene

Summaries for ENSG00000276054 Gene

GeneCards Summary for ENSG00000276054 Gene

ENSG00000276054 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000276054 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000276054 Gene

Genomics for ENSG00000276054 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000276054 Gene

Promoters and enhancers for ENSG00000276054 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J037385 Enhancer 0.4 ENCODE 500.7 -1.4 -1384 1.4 CTCF FOXA2 FOXA1 ZNF770 ENSG00000276054 TADA2A DUSP14 DDX52 C17orf78 piR-39858-273 ACACA lnc-HNF1B-3
GH17J037388 Enhancer 0.3 Ensembl 500.7 +1.7 1714 0.4 FOS ENSG00000276054 TADA2A C17orf78 lnc-SYNRG-1 ACACA lnc-HNF1B-3
GH17J037389 Enhancer 0.2 Ensembl 500.7 +1.2 1215 0.2 ENSG00000276054 TADA2A C17orf78 lnc-SYNRG-1 ACACA lnc-HNF1B-3
GH17J037391 Enhancer 0.9 Ensembl ENCODE 0.4 +5.1 5096 2 ZNF10 TRIM28 JUND OSR2 TCF12 ZBTB17 FOS MEF2B BATF IRF1 DDX52 ENSG00000276054 ACACA lnc-SYNRG-1 C17orf78 lnc-HNF1B-3
GH17J037397 Enhancer 0.8 ENCODE 0.4 +11.0 10976 0.2 CTCF NCOR1 ZNF10 REST CTBP1 RAD21 TRIM22 SMC3 TCF12 CEBPB C17orf78 ACACA lnc-SYNRG-1 ENSG00000276054 lnc-HNF1B-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000276054 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000276054 Gene

Genomic Locations for ENSG00000276054 Gene
chr17:37,386,886-37,387,926
(GRCh38/hg38)
Size:
1,041 bases
Orientation:
Plus strand

Genomic View for ENSG00000276054 Gene

Genes around ENSG00000276054 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000276054 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000276054 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000276054 Gene

Proteins for ENSG00000276054 Gene

Post-translational modifications for ENSG00000276054 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000276054 Gene

Domains & Families for ENSG00000276054 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000276054 Gene

Function for ENSG00000276054 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000276054 Gene

Localization for ENSG00000276054 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000276054 Gene

Pathways & Interactions for ENSG00000276054 Gene

PathCards logo

SuperPathways for ENSG00000276054 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000276054 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000276054 Gene

Drugs & Compounds for ENSG00000276054 Gene

No Compound Related Data Available

Transcripts for ENSG00000276054 Gene

mRNA/cDNA for ENSG00000276054 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000276054 Gene

No ASD Table

Relevant External Links for ENSG00000276054 Gene

GeneLoc Exon Structure for
ENSG00000276054

Expression for ENSG00000276054 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000276054 Gene

Orthologs for ENSG00000276054 Gene

Evolution for ENSG00000276054 Gene

ENSEMBL:
Gene Tree for ENSG00000276054 (if available)
TreeFam:
Gene Tree for ENSG00000276054 (if available)

No data available for Orthologs for ENSG00000276054 Gene

Paralogs for ENSG00000276054 Gene

No data available for Paralogs for ENSG00000276054 Gene

Variants for ENSG00000276054 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000276054 Gene

Disorders for ENSG00000276054 Gene

No disorders were found for ENSG00000276054 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000276054 Gene

Publications for ENSG00000276054 Gene

No publications were found for ENSG00000276054 Gene.

No data available for Mastermind for ENSG00000276054 Gene

Products for ENSG00000276054 Gene

Sources for ENSG00000276054 Gene