Aliases for ENSG00000275897 Gene

Subcategory (RNA class) for ENSG00000275897 Gene

lncRNA

Number of RNA Genes sources:

1 / 14

Aliases for ENSG00000275897 Gene

  • Novel Transcript 5
  • Lnc-RSAD1-3 168
  • AC021491.4 5

External Ids for ENSG00000275897 Gene

Summaries for ENSG00000275897 Gene

GeneCards Summary for ENSG00000275897 Gene

ENSG00000275897 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000275897 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000275897 Gene

Genomics for ENSG00000275897 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000275897 Gene

Promoters and enhancers for ENSG00000275897 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J050478 Enhancer 0.9 ENCODE dbSUPER 500.7 +1.0 975 0.9 TGIF2 ZKSCAN8 SAP130 RBM22 MIER3 FOXP1 DRAP1 SMAD4 HOMEZ SSRP1 ENSG00000275897 lnc-CHAD-1 RSAD1 CHAD
GH17J050476 Promoter/Enhancer 0.9 Ensembl dbSUPER 500.7 +0.3 282 0.2 NCOR1 JUND RAD21 RXRA TFAP4 HNF4A ARID3A HNF4G SP1 YY1 ENSG00000275897 FAM117A lnc-CHAD-1
GH17J050474 Enhancer 0.2 dbSUPER 500.7 -1.1 -1141 0.5 ENSG00000275897 ACSF2 CHAD
GH17J050477 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 +3.2 3162 2.4 EP300 HNRNPK ZBTB40 ZNF217 CTCF NRF1 MYC USF1 POLR2G NCOR1 RSAD1 lnc-CHAD-1 piR-58345 ACSF2 CHAD MYCBPAP ENSG00000275897
GH17J050471 Enhancer 0.9 ENCODE dbSUPER 0.7 -3.5 -3461 2.1 CTCF ZSCAN5C CTBP1 ZNF316 ZBTB17 MAFF MAFK SPI1 FOSL1 RCOR1 RSAD1 CHAD ENSG00000275897 HSALNG0117299 ACSF2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000275897 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000275897 Gene

Genomic Locations for ENSG00000275897 Gene
chr17:50,475,819-50,478,391
(GRCh38/hg38)
Size:
2,573 bases
Orientation:
Plus strand

Genomic View for ENSG00000275897 Gene

Genes around ENSG00000275897 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000275897 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000275897 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000275897 Gene

Proteins for ENSG00000275897 Gene

Post-translational modifications for ENSG00000275897 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000275897 Gene

Domains & Families for ENSG00000275897 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000275897 Gene

Function for ENSG00000275897 Gene

Phenotypes From GWAS Catalog for ENSG00000275897 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000275897 Gene

Localization for ENSG00000275897 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000275897 Gene

Pathways & Interactions for ENSG00000275897 Gene

PathCards logo

SuperPathways for ENSG00000275897 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000275897 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000275897 Gene

Drugs & Compounds for ENSG00000275897 Gene

No Compound Related Data Available

Transcripts for ENSG00000275897 Gene

mRNA/cDNA for ENSG00000275897 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000275897 Gene

No ASD Table

Relevant External Links for ENSG00000275897 Gene

GeneLoc Exon Structure for
ENSG00000275897

Expression for ENSG00000275897 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000275897 Gene

Orthologs for ENSG00000275897 Gene

Evolution for ENSG00000275897 Gene

ENSEMBL:
Gene Tree for ENSG00000275897 (if available)
TreeFam:
Gene Tree for ENSG00000275897 (if available)

No data available for Orthologs for ENSG00000275897 Gene

Paralogs for ENSG00000275897 Gene

No data available for Paralogs for ENSG00000275897 Gene

Variants for ENSG00000275897 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000275897 Gene

Disorders for ENSG00000275897 Gene

No disorders were found for ENSG00000275897 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000275897 Gene

Publications for ENSG00000275897 Gene

No publications were found for ENSG00000275897 Gene.

No data available for Mastermind for ENSG00000275897 Gene

Products for ENSG00000275897 Gene

Sources for ENSG00000275897 Gene