Aliases for ENSG00000275740 Gene

Aliases for ENSG00000275740 Gene

  • Novel Readthrough Transcript 5
  • Uncharacterized Protein 13
  • AC091959.3 5

External Ids for ENSG00000275740 Gene

Summaries for ENSG00000275740 Gene

GeneCards Summary for ENSG00000275740 Gene

ENSG00000275740 is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include nucleic acid binding and nucleotide binding. An important paralog of this gene is RBM27.

Additional gene information for ENSG00000275740 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000275740 Gene

Genomics for ENSG00000275740 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000275740 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J146202 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 +0.7 694 4 SP1 HNRNPL CREB1 GATAD2A PRDM10 ZNF629 RFX1 LEF1 SOX13 IKZF1 RBM27 ENSG00000275740 LARS1 RF00066-160 RNU7-180P POU4F3
GH05J146212 Enhancer 0.9 Ensembl 0.4 +11.8 11751 7 ZNF221 GATAD2A ZNF629 LEF1 ZNF692 ZNF300 PRDM1 ZNF37A CEBPA ZNF561 LARS1 TCERG1 RBM27 ENSG00000275740 RF00066-160 RNU7-180P POU4F3
GH05J146192 Enhancer 0.7 FANTOM5 0.4 -10.5 -10490 0.3 RNF2 GATAD2A ATF7 PRDM10 ZNF740 BRD9 CEBPA EP300 CEBPB MGA LARS1 GRXCR2 GPR151 RBM27 ENSG00000275740 lnc-RBM27-5
GH05J146190 Enhancer 0.7 Ensembl ENCODE 0.4 -12.6 -12646 1.4 ZNF512 IKZF1 PRDM1 PHF21A MCM3 GATAD2A ZNF366 ZEB2 JUND LARS1 RBM27 ENSG00000249363 lnc-RBM27-5 ENSG00000275740
GH05J146282 Promoter/Enhancer 1.1 EPDnew Ensembl ENCODE 0.2 +80.2 80181 2.1 PRDM10 JUND FOS JUN FOSL2 HIC1 ZNF366 ZNF362 POLR2A ZEB2 RBM27 LARS1 piR-57461-195 piR-50444-376 POU4F3 ENSG00000275740
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000275740 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000275740 Gene

Genomic Locations for ENSG00000275740 Gene
chr5:146,203,550-146,339,251
(GRCh38/hg38)
Size:
135,702 bases
Orientation:
Plus strand

Genomic View for ENSG00000275740 Gene

Genes around ENSG00000275740 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000275740 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000275740 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000275740 Gene

Proteins for ENSG00000275740 Gene

  • Protein details for ENSG00000275740 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    U3KPZ7-U3KPZ7_HUMAN
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    U3KPZ7

    Protein attributes for ENSG00000275740 Gene

    Size:
    1027 amino acids
    Molecular mass:
    114543 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000275740 Gene

Post-translational modifications for ENSG00000275740 Gene

No Post-translational modifications

Other Protein References for ENSG00000275740 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000275740 Gene

Domains & Families for ENSG00000275740 Gene

Gene Families for ENSG00000275740 Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for ENSG00000275740 Gene

genes like me logo Genes that share domains with ENSG00000275740: view

No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000275740 Gene

Function for ENSG00000275740 Gene

Phenotypes From GWAS Catalog for ENSG00000275740 Gene

Gene Ontology (GO) - Molecular Function for ENSG00000275740 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
GO:0003723 RNA binding IEA --
GO:0003729 mRNA binding IBA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ENSG00000275740: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000275740 Gene

Localization for ENSG00000275740 Gene

Subcellular locations from the

Human Protein Atlas (HPA)
  • Nuclear speckles (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for ENSG00000275740 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IBA --
genes like me logo Genes that share ontologies with ENSG00000275740: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for ENSG00000275740 Gene

Pathways & Interactions for ENSG00000275740 Gene

PathCards logo

SuperPathways for ENSG00000275740 Gene

No Data Available

Interacting Proteins for ENSG00000275740 Gene

Gene Ontology (GO) - Biological Process for ENSG00000275740 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006397 mRNA processing IEA --
GO:0046833 positive regulation of RNA export from nucleus IBA --
genes like me logo Genes that share ontologies with ENSG00000275740: view

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000275740 Gene

Drugs & Compounds for ENSG00000275740 Gene

No Compound Related Data Available

Transcripts for ENSG00000275740 Gene

mRNA/cDNA for ENSG00000275740 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000275740 Gene

No ASD Table

Relevant External Links for ENSG00000275740 Gene

GeneLoc Exon Structure for
ENSG00000275740

Expression for ENSG00000275740 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000275740 Gene

Orthologs for ENSG00000275740 Gene

Evolution for ENSG00000275740 Gene

ENSEMBL:
Gene Tree for ENSG00000275740 (if available)
TreeFam:
Gene Tree for ENSG00000275740 (if available)

No data available for Orthologs for ENSG00000275740 Gene

Paralogs for ENSG00000275740 Gene

Paralogs for ENSG00000275740 Gene

genes like me logo Genes that share paralogs with ENSG00000275740: view

Variants for ENSG00000275740 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000275740 Gene

Disorders for ENSG00000275740 Gene

Additional Disease Information for ENSG00000275740

No disorders were found for ENSG00000275740 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000275740 Gene

Publications for ENSG00000275740 Gene

  1. The DNA sequence and comparative analysis of human chromosome 5. (PMID: 15372022) Schmutz J … Rubin EM (Nature 2004) 13

No data available for Mastermind for ENSG00000275740 Gene

Products for ENSG00000275740 Gene

Sources for ENSG00000275740 Gene