Aliases for ENSG00000275719 Gene

Subcategory (RNA class) for ENSG00000275719 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for ENSG00000275719 Gene

  • Novel Transcript, Antisense To SLC1A5 5
  • HSALNG0126719 164
  • AC008622.2 5

External Ids for ENSG00000275719 Gene

Summaries for ENSG00000275719 Gene

GeneCards Summary for ENSG00000275719 Gene

ENSG00000275719 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000275719 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000275719 Gene

Genomics for ENSG00000275719 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000275719 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J046782 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 -2.0 -2014 6.8 RNF2 ARHGAP35 CEBPG SP1 HNRNPL CREB1 GATAD2A CTCF PRDM10 ZNF629 SLC1A5 CCDC61 ZC3H4 BICRA ENSG00000268810 SYMPK NOP53-AS1 CCDC9 STRN4 ENSG00000269148
GH19J046778 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -8.5 -8509 1.4 HNRNPL RBFOX2 PAF1 POLR2B NR3C1 ZNF121 POLR2A RF00017-3027 STRN4 PRKD2 ENSG00000275719 SLC1A5
GH19J046780 Enhancer 0.7 ENCODE 0.4 -6.7 -6680 0.4 CEBPG GATAD2A IKZF1 RCOR2 ZIC2 IRF2 CEBPA CEBPB SP1 POLR2A RF00017-3027 FKRP PRKD2 ENSG00000275719 SLC1A5 STRN4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000275719 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000275719 Gene

Genomic Locations for ENSG00000275719 Gene
chr19:46,787,815-46,789,043
(GRCh38/hg38)
Size:
1,229 bases
Orientation:
Plus strand

Genomic View for ENSG00000275719 Gene

Genes around ENSG00000275719 on UCSC Golden Path with GeneCards custom track
ENSG00000275719 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000275719 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000275719 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000275719 Gene

Proteins for ENSG00000275719 Gene

Post-translational modifications for ENSG00000275719 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000275719 Gene

Domains & Families for ENSG00000275719 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000275719 Gene

Function for ENSG00000275719 Gene

Phenotypes From GWAS Catalog for ENSG00000275719 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000275719 Gene

Localization for ENSG00000275719 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000275719 Gene

Pathways & Interactions for ENSG00000275719 Gene

PathCards logo

SuperPathways for ENSG00000275719 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000275719 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000275719 Gene

Drugs & Compounds for ENSG00000275719 Gene

No Compound Related Data Available

Transcripts for ENSG00000275719 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000275719 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000A9D25D_9606 lncRNA 1225 2

Ensembl: ENST00000612522 (view in UCSC) ,

LncBook: HSALNT0260909,

URS0000783E10_9606 lncRNA 1229 1

Ensembl: ENST00000617006 (view in UCSC) ,

ENSG00000275719 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000275719 Gene

No ASD Table

Relevant External Links for ENSG00000275719 Gene

GeneLoc Exon Structure for
ENSG00000275719

No data available for mRNA/cDNA for ENSG00000275719 Gene

Expression for ENSG00000275719 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000275719 Gene

Orthologs for ENSG00000275719 Gene

Evolution for ENSG00000275719 Gene

ENSEMBL:
Gene Tree for ENSG00000275719 (if available)
TreeFam:
Gene Tree for ENSG00000275719 (if available)

No data available for Orthologs for ENSG00000275719 Gene

Paralogs for ENSG00000275719 Gene

No data available for Paralogs for ENSG00000275719 Gene

Variants for ENSG00000275719 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000275719 Gene

Disorders for ENSG00000275719 Gene

Additional Disease Information for ENSG00000275719

No disorders were found for ENSG00000275719 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000275719 Gene

Publications for ENSG00000275719 Gene

No publications were found for ENSG00000275719 Gene.

No data available for Mastermind for ENSG00000275719 Gene

Products for ENSG00000275719 Gene

Sources for ENSG00000275719 Gene