ENSG00000275681 Gene (Pseudogene)

 

GC0XM021841
GIFtS:
3

Aliases for ENSG00000275681 Gene

Aliases for ENSG00000275681 Gene

  • LSM1 Homolog, U6 Small Nuclear RNA Associated (S. Cerevisiae) (LSM1) Pseudogene 5
  • U73479.1 5

External Ids for ENSG00000275681 Gene

Summaries for ENSG00000275681 Gene

GeneCards Summary for ENSG00000275681 Gene

ENSG00000275681 is a Pseudogene.

Additional gene information for ENSG00000275681 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000275681 Gene

Genomics for ENSG00000275681 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000275681 Gene

Promoters and enhancers for ENSG00000275681 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH0XJ021838 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 500.7 +2.0 1960 2.4 ZBTB40 ZNF217 EP300 CTCF SIN3A TCF12 POLR2G SP1 NCOR1 GTF2E2 ENSG00000275681 MBTPS2 YY2
GH0XJ021843 Enhancer 0.5 Ensembl 500.7 -1.3 -1340 0.2 MAFF MAFK HNF1A ZNF652 HNRNPUL1 SP1 SOX13 ENSG00000275681 YY2 MBTPS2 NONHSAG054139.2
GH0XJ021841 Enhancer 0.2 Ensembl 500.7 +0.1 60 0.2 ENSG00000275681 MBTPS2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000275681 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000275681 Gene

Genomic Locations for ENSG00000275681 Gene
chrX:21,841,794-21,841,961
(GRCh38/hg38)
Size:
168 bases
Orientation:
Minus strand

Genomic View for ENSG00000275681 Gene

Genes around ENSG00000275681 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000275681 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000275681 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000275681 Gene

Proteins for ENSG00000275681 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000275681 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000275681 Gene

Domains & Families for ENSG00000275681 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000275681 Gene

Function for ENSG00000275681 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000275681 Gene

Localization for ENSG00000275681 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000275681 Gene

Pathways & Interactions for ENSG00000275681 Gene

PathCards logo

SuperPathways for ENSG00000275681 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000275681 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000275681 Gene

Drugs & Compounds for ENSG00000275681 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000275681 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000275681 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000275681 Gene

No ASD Table

Relevant External Links for ENSG00000275681 Gene

GeneLoc Exon Structure for
ENSG00000275681

Expression for ENSG00000275681 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000275681 Gene

Orthologs for ENSG00000275681 Gene

Evolution for ENSG00000275681 Gene

ENSEMBL:
Gene Tree for ENSG00000275681 (if available)
TreeFam:
Gene Tree for ENSG00000275681 (if available)

No data available for Orthologs for ENSG00000275681 Gene

Paralogs for ENSG00000275681 Gene

No data available for Paralogs for ENSG00000275681 Gene

Variants for ENSG00000275681 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000275681 Gene

Disorders for ENSG00000275681 Gene

No disorders were found for ENSG00000275681 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000275681 Gene

Publications for ENSG00000275681 Gene

No publications were found for ENSG00000275681 Gene.

No data available for Mastermind for ENSG00000275681 Gene

Products for ENSG00000275681 Gene

Sources for ENSG00000275681 Gene