ENSG00000275680 Gene (RNA Gene)

 

GC17P058951
GIFtS:
4

Aliases for ENSG00000275680 Gene

Subcategory (RNA class) for ENSG00000275680 Gene

misc_RNA

Quality Score for this RNA gene is

12

Aliases for ENSG00000275680 Gene

External Ids for ENSG00000275680 Gene

Summaries for ENSG00000275680 Gene

GeneCards Summary for ENSG00000275680 Gene

ENSG00000275680 is an RNA Gene, and is affiliated with the misc_RNA class.

Rfam classification for ENSG00000275680 Gene

  • Metazoan signal recognition particle RNA

Additional gene information for ENSG00000275680 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000275680 Gene

Genomics for ENSG00000275680 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000275680 Gene

Promoters and enhancers for ENSG00000275680 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH17J058945 Enhancer 0.7 Ensembl ENCODE 0.6 -5.0 -4984 6 PPP1R10 MYC CEBPG YBX1 NFRKB DDX20 MNT SIX4 NFXL1 ZFP64 TRIM37 RAD51C MKS1 SRSF1 PPM1E NDUFB8P2 TUBD1 VEZF1 SMG8 ENSG00000275680
GH17J058960 Enhancer 0.7 Ensembl ENCODE 0.4 +9.2 9187 1 CTCF RAD21 SP1 RXRA YY1 NFIC GATA3 TFAP4 NFIA HNF4A lnc-TRIM37-2 ENSG00000275680 PPM1E
GH17J058957 Enhancer 0.7 Ensembl ENCODE 0.4 +5.9 5934 1.8 GATA3 ZNF217 CEBPG PKNOX1 EGR1 FOXA2 JUN PRDM6 ZBTB12 JUND RAD51C TRIM37 lnc-TRIM37-2 ENSG00000275680 PPM1E
GH17J058953 Enhancer 0.3 Ensembl 0.6 +3.1 3116 2.6 ZNF766 CTCF TRIM37 RAD51C PPM1E ENSG00000275680 lnc-TRIM37-2
GH17J058935 Enhancer 0.4 FANTOM5 0.4 -15.6 -15639 0.4 PPP1R10 YBX1 MNT CREB1 MKS1 SRSF1 NDUFB8P2 TUBD1 VEZF1 RF00017-2468 ENSG00000275680 PPM1E
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000275680 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000275680 Gene

Genomic Locations for ENSG00000275680 Gene
chr17:58,951,185-58,951,513
(GRCh38/hg38)
Size:
329 bases
Orientation:
Plus strand

Genomic View for ENSG00000275680 Gene

Genes around ENSG00000275680 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000275680 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000275680 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000275680 Gene

Proteins for ENSG00000275680 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000275680 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000275680 Gene

Domains & Families for ENSG00000275680 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000275680 Gene

Function for ENSG00000275680 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000275680 Gene

Localization for ENSG00000275680 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000275680 Gene

Pathways & Interactions for ENSG00000275680 Gene

PathCards logo

SuperPathways for ENSG00000275680 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000275680 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000275680 Gene

Drugs & Compounds for ENSG00000275680 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000275680 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000275680 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(1) Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000275680 Gene

No ASD Table

Relevant External Links for ENSG00000275680 Gene

GeneLoc Exon Structure for
ENSG00000275680

Expression for ENSG00000275680 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000275680 Gene

Orthologs for ENSG00000275680 Gene

Evolution for ENSG00000275680 Gene

ENSEMBL:
Gene Tree for ENSG00000275680 (if available)
TreeFam:
Gene Tree for ENSG00000275680 (if available)

No data available for Orthologs for ENSG00000275680 Gene

Paralogs for ENSG00000275680 Gene

No data available for Paralogs for ENSG00000275680 Gene

Variants for ENSG00000275680 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000275680 Gene

Disorders for ENSG00000275680 Gene

No disorders were found for ENSG00000275680 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000275680 Gene

Publications for ENSG00000275680 Gene

No publications were found for ENSG00000275680 Gene.

No data available for External Links for ENSG00000275680 Gene

Products for ENSG00000275680 Gene

Sources for ENSG00000275680 Gene