Aliases for ENSG00000275665 Gene

Subcategory (RNA class) for ENSG00000275665 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000275665 Gene

  • Novel Transcript, Antisense To MLLT6 5
  • NONHSAG021664.2 91
  • Lnc-PCGF2-1 165
  • AC006449.3 5

External Ids for ENSG00000275665 Gene

Summaries for ENSG00000275665 Gene

GeneCards Summary for ENSG00000275665 Gene

ENSG00000275665 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000275665 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000275665 Gene

Genomics for ENSG00000275665 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000275665 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J038718 Promoter/Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas 600.7 +1.0 1040 1.7 ZNF692 RBFOX2 PKNOX1 PATZ1 REST SP1 POLR2A EZH2 ZNF600 SCRT2 ENSG00000275665 LOC105371762 MIR4726 PCGF2 PSMB3 piR-50444-176 CISD3 MLLT6
GH17J038720 Promoter/Enhancer 1 Ensembl ENCODE 600.7 0.0 -3 0.3 RBFOX2 EZH2 SCRT2 ZBTB44 CTBP1 HES1 SCRT1 NFIC KLF8 NR2F1 ENSG00000275665 LOC105371762 MIR4726 PSMB3 CISD3 MLLT6
GH17J038721 Enhancer 0.6 ENCODE 600.7 +0.2 159 0 RBFOX2 EZH2 SCRT2 CTBP1 HES1 SCRT1 NFIC KLF8 NR2F1 NR2F6 ENSG00000275665 LOC105371762 MIR4726 PSMB3 CISD3 MLLT6
GH17J038715 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.7 +4.4 4371 1 RBFOX2 POLR2A ZNF513 PAF1 EGR2 SP1 EGR1 piR-50444-176 PCGF2 PSMB3 ENSG00000275665 MIR4726 CISD3 MLLT6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000275665 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000275665 Gene

Genomic Locations for ENSG00000275665 Gene
chr17:38,715,328-38,720,272
(GRCh38/hg38)
Size:
4,945 bases
Orientation:
Minus strand

Genomic View for ENSG00000275665 Gene

Genes around ENSG00000275665 on UCSC Golden Path with GeneCards custom track
ENSG00000275665 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000275665 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000275665 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000275665 Gene

Proteins for ENSG00000275665 Gene

Post-translational modifications for ENSG00000275665 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000275665 Gene

Domains & Families for ENSG00000275665 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000275665 Gene

Function for ENSG00000275665 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000275665 Gene

Localization for ENSG00000275665 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000275665 Gene

Pathways & Interactions for ENSG00000275665 Gene

PathCards logo

SuperPathways for ENSG00000275665 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000275665 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000275665 Gene

Drugs & Compounds for ENSG00000275665 Gene

No Compound Related Data Available

Transcripts for ENSG00000275665 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000275665 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00000E3A7E_9606 lncRNA 563 3

Ensembl: ENST00000620144 (view in UCSC) ,

LNCipedia: lnc-PCGF2-1:1,

NONCODE: NONHSAT053352.2,

ENSG00000275665 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000275665 Gene

No ASD Table

Relevant External Links for ENSG00000275665 Gene

GeneLoc Exon Structure for
ENSG00000275665

No data available for mRNA/cDNA for ENSG00000275665 Gene

Expression for ENSG00000275665 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000275665 Gene

Orthologs for ENSG00000275665 Gene

Evolution for ENSG00000275665 Gene

ENSEMBL:
Gene Tree for ENSG00000275665 (if available)
TreeFam:
Gene Tree for ENSG00000275665 (if available)

No data available for Orthologs for ENSG00000275665 Gene

Paralogs for ENSG00000275665 Gene

No data available for Paralogs for ENSG00000275665 Gene

Variants for ENSG00000275665 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000275665 Gene

Disorders for ENSG00000275665 Gene

Additional Disease Information for ENSG00000275665

No disorders were found for ENSG00000275665 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000275665 Gene

Publications for ENSG00000275665 Gene

No publications were found for ENSG00000275665 Gene.

No data available for Mastermind for ENSG00000275665 Gene

Products for ENSG00000275665 Gene

Sources for ENSG00000275665 Gene