Aliases for ENSG00000275532 Gene

Subcategory (RNA class) for ENSG00000275532 Gene

lncRNA

Number of RNA Genes sources:

4 / 17

Aliases for ENSG00000275532 Gene

  • Novel Transcript, Antisense To MLLT6 5
  • NONHSAG021663.2 91
  • HSALNG0116178 164
  • AC006449.2 5
  • Lnc-EPOP-2 165

External Ids for ENSG00000275532 Gene

Previous GeneCards Identifiers for ENSG00000275532 Gene

  • GC17M038704

Summaries for ENSG00000275532 Gene

GeneCards Summary for ENSG00000275532 Gene

ENSG00000275532 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000275532 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000275532 Gene

Genomics for ENSG00000275532 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000275532 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J038699 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 +2.5 2484 8 SP1 HNRNPL GATAD2A PRDM10 ZNF629 TFE3 SOX13 IKZF1 NFKBIZ ZNF692 MLLT6 ENSG00000277969 MIR4734 CDK12 LOC105371762 SNORA21 MED1 PCGF2 RPL23 RPL19
GH17J038709 Enhancer 1 Ensembl ENCODE dbSUPER 0.7 -4.5 -4507 3.4 POLR2A ZIC2 RBFOX2 NR2C1 SCRT2 MNT EGR1 KDM1A RBM22 ZFHX2 PSMB3 ENSG00000275532 piR-50444-176 MLLT6 CISD3
GH17J038700 Enhancer 0.9 ENCODE dbSUPER 0.4 +6.8 6798 0.2 IKZF1 RXRB NR2C1 IRF2 SP1 GABPA ZNF600 MGA MAFF ZBTB17 LOC105371763 ENSG00000275532 MLLT6 piR-57133-257 EPOP
GH17J038693 Enhancer 0.8 ENCODE dbSUPER 0.4 +12.3 12314 1.3 IKZF1 SP1 ZNF600 ZNF341 RNF2 ZBTB17 SCRT1 NR2F2 RCOR1 RAD21 piR-57133-257 LOC105371763 ENSG00000275532 MLLT6 EPOP
GH17J038712 Enhancer 0.6 Ensembl dbSUPER 0.4 -7.3 -7340 0.8 RFX1 ZNF341 POLR2A ZNF189 ZNF398 piR-50444-176 PCGF2 PSMB3 ENSG00000275532 MLLT6 CISD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000275532 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000275532 Gene

Genomic Locations for ENSG00000275532 Gene
chr17:38,681,426-38,706,261
(GRCh38/hg38)
Size:
24,836 bases
Orientation:
Minus strand

Genomic View for ENSG00000275532 Gene

Genes around ENSG00000275532 on UCSC Golden Path with GeneCards custom track
ENSG00000275532 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000275532 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000275532 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000275532 Gene

Proteins for ENSG00000275532 Gene

Post-translational modifications for ENSG00000275532 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000275532 Gene

Domains & Families for ENSG00000275532 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000275532 Gene

Function for ENSG00000275532 Gene

Phenotypes From GWAS Catalog for ENSG00000275532 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000275532 Gene

Localization for ENSG00000275532 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000275532 Gene

Pathways & Interactions for ENSG00000275532 Gene

PathCards logo

SuperPathways for ENSG00000275532 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000275532 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000275532 Gene

Drugs & Compounds for ENSG00000275532 Gene

No Compound Related Data Available

Transcripts for ENSG00000275532 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000275532 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000018E45E_9606 lncRNA 486 3

Ensembl: ENST00000618407 (view in UCSC) ,

LNCipedia: lnc-EPOP-2:1,

NONCODE: NONHSAT053351.2,

URS0000D5C517_9606 lncRNA 1927 2

LncBook: HSALNT0240211,

LNCipedia: lnc-EPOP-2:6,

URS00009BA6AC_9606 lncRNA 842 2

LncBook: HSALNT0240203,

NONCODE: NONHSAT176160.1,

URS00008B63AE_9606 lncRNA 682 2

LNCipedia: lnc-EPOP-2:8,

NONCODE: NONHSAT053350.2,

URS00009C45D8_9606 lncRNA 497 2

LncBook: HSALNT0240215,

NONCODE: NONHSAT176161.1,

ENSG00000275532 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000275532 Gene

No ASD Table

Relevant External Links for ENSG00000275532 Gene

GeneLoc Exon Structure for
ENSG00000275532

No data available for mRNA/cDNA for ENSG00000275532 Gene

Expression for ENSG00000275532 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000275532 Gene

Orthologs for ENSG00000275532 Gene

Evolution for ENSG00000275532 Gene

ENSEMBL:
Gene Tree for ENSG00000275532 (if available)
TreeFam:
Gene Tree for ENSG00000275532 (if available)

No data available for Orthologs for ENSG00000275532 Gene

Paralogs for ENSG00000275532 Gene

No data available for Paralogs for ENSG00000275532 Gene

Variants for ENSG00000275532 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000275532 Gene

Disorders for ENSG00000275532 Gene

No disorders were found for ENSG00000275532 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000275532 Gene

Publications for ENSG00000275532 Gene

No publications were found for ENSG00000275532 Gene.

No data available for Mastermind for ENSG00000275532 Gene

Products for ENSG00000275532 Gene

Sources for ENSG00000275532 Gene