Aliases for ENSG00000274996 Gene

Subcategory (RNA class) for ENSG00000274996 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for ENSG00000274996 Gene

  • Novel Transcript, Antisense To SRCIN1 5
  • Lnc-ARHGAP23-1 170
  • NONHSAG021657 94
  • HSALNG0116170 169
  • AC006449.1 5

External Ids for ENSG00000274996 Gene

Additional External Ids for ENSG00000274996 Gene

Summaries for ENSG00000274996 Gene

GeneCards Summary for ENSG00000274996 Gene

ENSG00000274996 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000274996 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000274996 Gene

Genomics for ENSG00000274996 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000274996 Gene

Promoters and enhancers for ENSG00000274996 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J038600 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 +0.9 916 3.2 MIXL1 ZNF701 BCL6B ZNF148 SP7 ZSCAN21 PRDM1 SP5 TRIM24 MTA1 ENSG00000274996 CDK12 MED1 LOC105371762 SNORA21 RPL19 SRCIN1 PIP4K2B SOCS7 GPR179
GH17J038598 Enhancer 1.1 ENCODE dbSUPER 0.6 -2.3 -2296 0.2 ZBTB40 SP1 RBPJ CTBP1 MIXL1 L3MBTL2 TEAD4 ZNF148 GTF2F1 SP7 CDK12 MED1 SNORA21 LOC105371762 LINC00672 ENSG00000274996 SRCIN1 HSALNG0116168
GH17J038590 Enhancer 1.3 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -9.3 -9347 1.8 NR2F6 MYC HLF MAX SP1 TFE3 CEBPG SP5 IKZF1 ZIC2 ENSG00000274996 HSALNG0116168 SRCIN1
GH17J038584 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -14.5 -14511 5.5 SIN3A CTCF RBPJ NR2F1 NR2F6 MIXL1 ELF1 ZNF121 RAD21 MNT FBXL20 HSALNG0116168 ENSG00000274996 SRCIN1
GH17J038605 Promoter/Enhancer 0.8 EPDnew dbSUPER 0.6 +3.5 3489 0.1 GMEB1 ZNF740 ZNF629 CREM TFAP4 SRCIN1 ENSG00000274996
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000274996 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000274996 Gene

Genomic Locations for ENSG00000274996 Gene
chr17:38,601,049-38,602,701
(GRCh38/hg38)
Size:
1,653 bases
Orientation:
Plus strand

Genomic View for ENSG00000274996 Gene

Genes around ENSG00000274996 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000274996 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000274996 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000274996 Gene

Proteins for ENSG00000274996 Gene

Post-translational modifications for ENSG00000274996 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000274996 Gene

Domains & Families for ENSG00000274996 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000274996 Gene

Function for ENSG00000274996 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000274996 Gene

Localization for ENSG00000274996 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000274996 Gene

Pathways & Interactions for ENSG00000274996 Gene

PathCards logo

SuperPathways for ENSG00000274996 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000274996 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000274996 Gene

Drugs & Compounds for ENSG00000274996 Gene

No Compound Related Data Available

Transcripts for ENSG00000274996 Gene

mRNA/cDNA for ENSG00000274996 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(2) LNCipedia transcripts :
(1) LncBook transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000274996 Gene

No ASD Table

Relevant External Links for ENSG00000274996 Gene

GeneLoc Exon Structure for
ENSG00000274996

Expression for ENSG00000274996 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000274996 Gene

Orthologs for ENSG00000274996 Gene

Evolution for ENSG00000274996 Gene

ENSEMBL:
Gene Tree for ENSG00000274996 (if available)
TreeFam:
Gene Tree for ENSG00000274996 (if available)

No data available for Orthologs for ENSG00000274996 Gene

Paralogs for ENSG00000274996 Gene

No data available for Paralogs for ENSG00000274996 Gene

Variants for ENSG00000274996 Gene

Variation tolerance for ENSG00000274996 Gene

Gene Damage Index Score: 1.58; 30.54% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Additional Variant Information for ENSG00000274996 Gene

Disorders for ENSG00000274996 Gene

No disorders were found for ENSG00000274996 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000274996 Gene

Publications for ENSG00000274996 Gene

No publications were found for ENSG00000274996 Gene.

No data available for External Links for ENSG00000274996 Gene

Products for ENSG00000274996 Gene

Sources for ENSG00000274996 Gene