Aliases for ENSG00000274895 Gene

Subcategory (RNA class) for ENSG00000274895 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000274895 Gene

  • Novel Transcript, Antisense To PROX1 5
  • NONHSAG004261.2 91
  • HSALNG0010460 164
  • AC011700.1 5
  • PROX1-AS1 165

External Ids for ENSG00000274895 Gene

Summaries for ENSG00000274895 Gene

GeneCards Summary for ENSG00000274895 Gene

ENSG00000274895 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000274895 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000274895 Gene

Genomics for ENSG00000274895 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000274895 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J213984 Enhancer 0.9 FANTOM5 dbSUPER 600.7 +1.9 1862 0.1 GATAD2A PRDM10 ZNF629 ZNF692 PRDM1 ZIC2 PATZ1 EZH2 ZNF341 ZNF561 PROX1 ENSG00000274895 PROX1-AS1 SMYD2
GH01J213985 Promoter/Enhancer 0.8 Ensembl dbSUPER 600.7 +0.7 718 0.2 RBFOX2 EZH2 CBX8 ZNF202 YY1 ENSG00000274895 PROX1 PROX1-AS1 SMYD2
GH01J213986 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 -2.3 -2281 5.4 HNRNPL GATAD2A PRDM10 ZNF629 REST ZNF512 NFKBIZ RFX5 KDM1A ZNF692 PROX1 PROX1-AS1 ENSG00000274895 lnc-SMYD2-1 SMYD2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000274895 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000274895 Gene

Genomic Locations for ENSG00000274895 Gene
chr1:213,983,793-213,986,419
(GRCh38/hg38)
Size:
2,627 bases
Orientation:
Minus strand

Genomic View for ENSG00000274895 Gene

Genes around ENSG00000274895 on UCSC Golden Path with GeneCards custom track
ENSG00000274895 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000274895 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000274895 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000274895 Gene

Proteins for ENSG00000274895 Gene

Post-translational modifications for ENSG00000274895 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000274895 Gene

Domains & Families for ENSG00000274895 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000274895 Gene

Function for ENSG00000274895 Gene

Phenotypes From GWAS Catalog for ENSG00000274895 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000274895 Gene

Localization for ENSG00000274895 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000274895 Gene

Pathways & Interactions for ENSG00000274895 Gene

PathCards logo

SuperPathways for ENSG00000274895 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000274895 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000274895 Gene

Drugs & Compounds for ENSG00000274895 Gene

No Compound Related Data Available

Transcripts for ENSG00000274895 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000274895 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00007836D4_9606 lncRNA 2627 3

Ensembl: ENST00000610409 (view in UCSC) ,

LncBook: HSALNT0021739,

LNCipedia: PROX1-AS1:19,

URS00008BC442_9606 lncRNA 505 3

LncBook: HSALNT0021671,

LNCipedia: PROX1-AS1:11,

NONCODE: NONHSAT009432.2,

URS00008B8552_9606 lncRNA 372 3

LncBook: HSALNT0021729,

LNCipedia: PROX1-AS1:9,

NONCODE: NONHSAT009446.2,

URS0000D59191_9606 lncRNA 10296 2

LncBook: HSALNT0021629,

LNCipedia: PROX1-AS1:69,

URS0000D59711_9606 lncRNA 8526 2

LncBook: HSALNT0021633,

LNCipedia: PROX1-AS1:68,

ENSG00000274895 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000274895 Gene

No ASD Table

Relevant External Links for ENSG00000274895 Gene

GeneLoc Exon Structure for
ENSG00000274895

No data available for mRNA/cDNA for ENSG00000274895 Gene

Expression for ENSG00000274895 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000274895 Gene

Orthologs for ENSG00000274895 Gene

Evolution for ENSG00000274895 Gene

ENSEMBL:
Gene Tree for ENSG00000274895 (if available)
TreeFam:
Gene Tree for ENSG00000274895 (if available)

No data available for Orthologs for ENSG00000274895 Gene

Paralogs for ENSG00000274895 Gene

No data available for Paralogs for ENSG00000274895 Gene

Variants for ENSG00000274895 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000274895 Gene

Disorders for ENSG00000274895 Gene

No disorders were found for ENSG00000274895 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000274895 Gene

Publications for ENSG00000274895 Gene

No publications were found for ENSG00000274895 Gene.

No data available for Mastermind for ENSG00000274895 Gene

Products for ENSG00000274895 Gene

Sources for ENSG00000274895 Gene