Aliases for ENSG00000274425 Gene

Subcategory (RNA class) for ENSG00000274425 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for ENSG00000274425 Gene

  • Novel Transcript, Antisense To ICAM3 5
  • NONHSAG024787.2 91
  • AC114271.1 5

External Ids for ENSG00000274425 Gene

Summaries for ENSG00000274425 Gene

GeneCards Summary for ENSG00000274425 Gene

ENSG00000274425 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000274425 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000274425 Gene

Genomics for ENSG00000274425 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000274425 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J010331 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 +0.4 388 3.7 SP1 HNRNPL GATAD2A ATF7 PRDM10 ZNF629 TFE3 RFX1 SIX5 IKZF1 RAVER1 ENSG00000274425 piR-54014 LOC100419831 ILF3 ZNF846 ZNF177 ENSG00000270614 DNMT1 ILF3-DT
GH19J010338 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 0.4 +6.3 6254 1.9 POLR2A BACH1 LARP7 RELA SMAD5 YY1 SIN3A ELK1 DPF2 RELB ICAM3 ENSG00000167807 ZGLP1 TYK2 ICAM4 ICAM5 ICAM1 MRPL4 ENSG00000274425 RAVER1
GH19J010321 Enhancer 0.7 Ensembl ENCODE 0.4 -11.1 -11093 1.8 POLR2A ZIC2 ZSCAN4 RBFOX2 KLF8 KLF9 SUPT5H KLF1 POLR2B ZBTB7A ENSG00000267303 RAVER1 ICAM3 FDX2 ENSG00000274425
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000274425 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000274425 Gene

Genomic Locations for ENSG00000274425 Gene
chr19:10,333,289-10,339,181
(GRCh38/hg38)
Size:
5,893 bases
Orientation:
Plus strand

Genomic View for ENSG00000274425 Gene

Genes around ENSG00000274425 on UCSC Golden Path with GeneCards custom track
ENSG00000274425 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000274425 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000274425 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000274425 Gene

Proteins for ENSG00000274425 Gene

Post-translational modifications for ENSG00000274425 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000274425 Gene

Domains & Families for ENSG00000274425 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000274425 Gene

Function for ENSG00000274425 Gene

Phenotypes From GWAS Catalog for ENSG00000274425 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000274425 Gene

Localization for ENSG00000274425 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000274425 Gene

Pathways & Interactions for ENSG00000274425 Gene

PathCards logo

SuperPathways for ENSG00000274425 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000274425 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000274425 Gene

Drugs & Compounds for ENSG00000274425 Gene

No Compound Related Data Available

Transcripts for ENSG00000274425 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000274425 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000077BCFA_9606 lncRNA 2813 2

Ensembl: ENST00000612689 (view in UCSC) ,

NONCODE: NONHSAT179439.1,

URS00008C40E0_9606 lncRNA 2635 1

NONCODE: NONHSAT061059.2,

URS00009C4073_9606 lncRNA 2113 1

NONCODE: NONHSAT179440.1,

ENSG00000274425 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000274425 Gene

No ASD Table

Relevant External Links for ENSG00000274425 Gene

GeneLoc Exon Structure for
ENSG00000274425

No data available for mRNA/cDNA for ENSG00000274425 Gene

Expression for ENSG00000274425 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000274425 Gene

Orthologs for ENSG00000274425 Gene

Evolution for ENSG00000274425 Gene

ENSEMBL:
Gene Tree for ENSG00000274425 (if available)
TreeFam:
Gene Tree for ENSG00000274425 (if available)

No data available for Orthologs for ENSG00000274425 Gene

Paralogs for ENSG00000274425 Gene

No data available for Paralogs for ENSG00000274425 Gene

Variants for ENSG00000274425 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000274425 Gene

Disorders for ENSG00000274425 Gene

Additional Disease Information for ENSG00000274425

No disorders were found for ENSG00000274425 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000274425 Gene

Publications for ENSG00000274425 Gene

No publications were found for ENSG00000274425 Gene.

No data available for Mastermind for ENSG00000274425 Gene

Products for ENSG00000274425 Gene

Sources for ENSG00000274425 Gene