Aliases for ENSG00000274251 Gene

Subcategory (RNA class) for ENSG00000274251 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000274251 Gene

  • Novel Transcript 5
  • NONHSAG008792 92
  • HSALNG0085130 167
  • AP003419.2 5
  • Lnc-SSH3-5 168

External Ids for ENSG00000274251 Gene

Summaries for ENSG00000274251 Gene

GeneCards Summary for ENSG00000274251 Gene

ENSG00000274251 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000274251 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000274251 Gene

Genomics for ENSG00000274251 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000274251 Gene

Promoters and enhancers for ENSG00000274251 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J067350 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 +1.1 1103 7.8 RXRA EP300 ZBTB40 ZNF217 CTCF TCF12 POLR2G SP1 NCOR1 PHF8 POLD4 ENSG00000274251 RBM4 KMT5B RCE1 KDM2A SSH3 ANKRD13D RAD9A PTPRCAP
GH11J067347 Enhancer 1.1 ENCODE dbSUPER 0.7 -4.6 -4569 2.3 PHB2 ZBTB11 AFF1 TARDBP HES1 TOE1 MYC CTBP1 HINFP MXI1 RAD9A ENSG00000256514 CLCF1 RCE1 RNU6-1238P TBC1D10C SSH3 CARNS1 PPP1CA ANKRD13D
GH11J067344 Enhancer 1 ENCODE dbSUPER 0.4 -7.8 -7843 3 ZNF217 CTCF TCF12 KLF4 RFX1 CUX1 CHD1 RAD21 TRIM22 GATAD2B CLCF1 ENSG00000256514 SSH3 ANKRD13D RAD9A PPP1CA RNU6-1238P TBC1D10C CARNS1 RHOD
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000274251 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000274251 Gene

Genomic Locations for ENSG00000274251 Gene
chr11:67,353,629-67,354,348
(GRCh38/hg38)
Size:
720 bases
Orientation:
Plus strand

Genomic View for ENSG00000274251 Gene

Genes around ENSG00000274251 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000274251 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000274251 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000274251 Gene

Proteins for ENSG00000274251 Gene

Post-translational modifications for ENSG00000274251 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000274251 Gene

Domains & Families for ENSG00000274251 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000274251 Gene

Function for ENSG00000274251 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000274251 Gene

Localization for ENSG00000274251 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000274251 Gene

Pathways & Interactions for ENSG00000274251 Gene

PathCards logo

SuperPathways for ENSG00000274251 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000274251 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000274251 Gene

Drugs & Compounds for ENSG00000274251 Gene

No Compound Related Data Available

Transcripts for ENSG00000274251 Gene

mRNA/cDNA for ENSG00000274251 Gene

3 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
1 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000274251 Gene

No ASD Table

Relevant External Links for ENSG00000274251 Gene

GeneLoc Exon Structure for
ENSG00000274251

Expression for ENSG00000274251 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000274251 Gene

Orthologs for ENSG00000274251 Gene

Evolution for ENSG00000274251 Gene

ENSEMBL:
Gene Tree for ENSG00000274251 (if available)
TreeFam:
Gene Tree for ENSG00000274251 (if available)

No data available for Orthologs for ENSG00000274251 Gene

Paralogs for ENSG00000274251 Gene

No data available for Paralogs for ENSG00000274251 Gene

Variants for ENSG00000274251 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000274251 Gene

Disorders for ENSG00000274251 Gene

No disorders were found for ENSG00000274251 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000274251 Gene

Publications for ENSG00000274251 Gene

No publications were found for ENSG00000274251 Gene.

No data available for Mastermind for ENSG00000274251 Gene

Products for ENSG00000274251 Gene

Sources for ENSG00000274251 Gene