Aliases for ENSG00000274227 Gene

Subcategory (RNA class) for ENSG00000274227 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for ENSG00000274227 Gene

  • Novel Transcript, Antisense To ERP29 5
  • Lnc-TMEM116-7 165
  • AC073575.4 5

External Ids for ENSG00000274227 Gene

Summaries for ENSG00000274227 Gene

GeneCards Summary for ENSG00000274227 Gene

ENSG00000274227 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000274227 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000274227 Gene

Genomics for ENSG00000274227 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000274227 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J112018 Enhancer 0.7 ENCODE dbSUPER 600.7 +0.2 165 2.2 POLR2A ZNF174 ZNF600 CEBPB FOS RBM22 WT1 MAFK NFE2L2 ENSG00000274227 ATXN2 ERP29 NAA25
GH12J112017 Enhancer 0.4 ENCODE dbSUPER 600.7 +1.8 1839 0.5 CTBP1 ENSG00000274227 ERP29 NAA25
GH12J112011 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +5.9 5867 4.3 RNF2 SP1 CREB1 GATAD2A PRDM10 ZNF629 REST TFE3 LEF1 IKZF1 TMEM116 ERP29 lnc-NAA25-5 RPL6 MAPKAPK5 HECTD4 ADAM1A NAA25 HSPA8P14 TRAFD1
GH12J112025 Enhancer 0.7 Ensembl dbSUPER 0.4 -7.2 -7170 2 POLR2A PRDM1 RBM22 ZNF623 ZNF189 GATA3 STAT1 ZNF664 SP7 TMEM116 ACAD10 ADAM1A ENSG00000274227 lnc-TMEM116-4 ERP29 NAA25
GH12J112021 Enhancer 0.4 dbSUPER 0.7 -3.3 -3282 2 POLR2A RBM22 ZNF362 TMEM116 ADAM1A ENSG00000274227 ERP29 lnc-TMEM116-4 NAA25
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000274227 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000274227 Gene

Genomic Locations for ENSG00000274227 Gene
chr12:112,018,804-112,019,430
(GRCh38/hg38)
Size:
627 bases
Orientation:
Minus strand

Genomic View for ENSG00000274227 Gene

Genes around ENSG00000274227 on UCSC Golden Path with GeneCards custom track
ENSG00000274227 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000274227 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000274227 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000274227 Gene

Proteins for ENSG00000274227 Gene

Post-translational modifications for ENSG00000274227 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000274227 Gene

Domains & Families for ENSG00000274227 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000274227 Gene

Function for ENSG00000274227 Gene

Phenotypes From GWAS Catalog for ENSG00000274227 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000274227 Gene

Localization for ENSG00000274227 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000274227 Gene

Pathways & Interactions for ENSG00000274227 Gene

PathCards logo

SuperPathways for ENSG00000274227 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000274227 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000274227 Gene

Drugs & Compounds for ENSG00000274227 Gene

No Compound Related Data Available

Transcripts for ENSG00000274227 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000274227 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00007703B9_9606 lncRNA 627 2

Ensembl: ENST00000614212 (view in UCSC) ,

LNCipedia: lnc-TMEM116-7:1,

ENSG00000274227 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000274227 Gene

No ASD Table

Relevant External Links for ENSG00000274227 Gene

GeneLoc Exon Structure for
ENSG00000274227

No data available for mRNA/cDNA for ENSG00000274227 Gene

Expression for ENSG00000274227 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000274227 Gene

Orthologs for ENSG00000274227 Gene

Evolution for ENSG00000274227 Gene

ENSEMBL:
Gene Tree for ENSG00000274227 (if available)
TreeFam:
Gene Tree for ENSG00000274227 (if available)

No data available for Orthologs for ENSG00000274227 Gene

Paralogs for ENSG00000274227 Gene

No data available for Paralogs for ENSG00000274227 Gene

Variants for ENSG00000274227 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000274227 Gene

Disorders for ENSG00000274227 Gene

Additional Disease Information for ENSG00000274227

No disorders were found for ENSG00000274227 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000274227 Gene

Publications for ENSG00000274227 Gene

No publications were found for ENSG00000274227 Gene.

No data available for Mastermind for ENSG00000274227 Gene

Products for ENSG00000274227 Gene

Sources for ENSG00000274227 Gene