Aliases for ENSG00000273948 Gene

Subcategory (RNA class) for ENSG00000273948 Gene

misc_RNA

Number of RNA Genes sources:

0 / 14

Aliases for ENSG00000273948 Gene

  • AC020558.3 5

External Ids for ENSG00000273948 Gene

Summaries for ENSG00000273948 Gene

GeneCards Summary for ENSG00000273948 Gene

ENSG00000273948 is an RNA Gene, and is affiliated with the misc_RNA class.

Rfam classification for ENSG00000273948 Gene

  • Smith-Magenis syndrome chromosome region, candidate 2 conserved region 1

Additional gene information for ENSG00000273948 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000273948 Gene

Genomics for ENSG00000273948 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000273948 Gene

Promoters and enhancers for ENSG00000273948 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J017675 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 +1.3 1335 3 TRIM28 TRIM22 MCM3 RBM25 NR2F2 KDM1A ZBTB17 ZFP36 ZKSCAN1 FOS ENSG00000273948 ENSG00000274836 SMCR8 RPL13P12 TOM1L2 SMCR2
GH17J017662 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -12.2 -12166 3.2 EP300 CTCF JUND FOS ZNF623 RFX1 RELA RCOR1 SKI U2AF2 PEMT TOM1L2 SMCR2 ENSG00000273948 piR-59928-062
GH17J017669 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -5.8 -5806 1.5 ZNF266 WT1 POLR2A SMAD4 SMARCA4 NFIL3 HLF KDM1A MAZ HNRNPK SMCR8 DRG2 RPL13P12 TOP3A FLII TOM1L2 ENSG00000273948 piR-59928-062
GH17J017666 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -8.7 -8695 1.1 CTCF SIN3A ZBTB17 USF1 SAP130 MXD4 MAX ZMYM3 DMAP1 MXI1 TOM1L2 ENSG00000273948 piR-59928-062
GH17J017673 Enhancer 0.6 dbSUPER 0.7 -3.7 -3733 0.9 HDAC2 KDM1A ZFHX2 BCOR ZBTB48 ZNF189 ZMYM3 ZNF664 ETV4 SOX5 ENSG00000273948 piR-59928-062
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000273948 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000273948 Gene

Genomic Locations for ENSG00000273948 Gene
chr17:17,675,366-17,675,522
(GRCh38/hg38)
Size:
157 bases
Orientation:
Plus strand

Genomic View for ENSG00000273948 Gene

Genes around ENSG00000273948 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000273948 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000273948 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000273948 Gene

Proteins for ENSG00000273948 Gene

Post-translational modifications for ENSG00000273948 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000273948 Gene

Domains & Families for ENSG00000273948 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000273948 Gene

Function for ENSG00000273948 Gene

Phenotypes From GWAS Catalog for ENSG00000273948 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000273948 Gene

Localization for ENSG00000273948 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000273948 Gene

Pathways & Interactions for ENSG00000273948 Gene

PathCards logo

SuperPathways for ENSG00000273948 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000273948 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000273948 Gene

Drugs & Compounds for ENSG00000273948 Gene

No Compound Related Data Available

Transcripts for ENSG00000273948 Gene

mRNA/cDNA for ENSG00000273948 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000273948 Gene

No ASD Table

Relevant External Links for ENSG00000273948 Gene

GeneLoc Exon Structure for
ENSG00000273948

Expression for ENSG00000273948 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000273948 Gene

Orthologs for ENSG00000273948 Gene

Evolution for ENSG00000273948 Gene

ENSEMBL:
Gene Tree for ENSG00000273948 (if available)
TreeFam:
Gene Tree for ENSG00000273948 (if available)

No data available for Orthologs for ENSG00000273948 Gene

Paralogs for ENSG00000273948 Gene

No data available for Paralogs for ENSG00000273948 Gene

Variants for ENSG00000273948 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000273948 Gene

Disorders for ENSG00000273948 Gene

No disorders were found for ENSG00000273948 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000273948 Gene

Publications for ENSG00000273948 Gene

No publications were found for ENSG00000273948 Gene.

No data available for Mastermind for ENSG00000273948 Gene

Products for ENSG00000273948 Gene

Sources for ENSG00000273948 Gene