Aliases for ENSG00000273797 Gene

Subcategory (RNA class) for ENSG00000273797 Gene

lncRNA

Quality Score for this RNA gene is

12

Aliases for ENSG00000273797 Gene

  • Novel Transcript, Sense Intronic To KIAA0247 5
  • Lnc-PLEKHD1-4 170
  • AL133445.2 5

External Ids for ENSG00000273797 Gene

Summaries for ENSG00000273797 Gene

GeneCards Summary for ENSG00000273797 Gene

ENSG00000273797 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000273797 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000273797 Gene

Genomics for ENSG00000273797 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000273797 Gene

Promoters and enhancers for ENSG00000273797 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J069609 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 -1.1 -1141 12.2 ZNF24 SP1 CTCF NR2F1 NR2F6 MYC ETV6 RELA HLF L3MBTL2 SUSD6 ENSG00000273797 SRSF5 MED6 SMOC1 DCAF5 lnc-CCDC177-6 lnc-PLEKHD1-3
GH14J069628 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +14.3 14271 5.4 TEAD4 SP1 TFE3 CBFA2T2 SMARCA4 IKZF1 CEBPA RXRA IKZF2 PKNOX1 SRSF5 SUSD6 DCAF5 ENSG00000273797 piR-35674-143
GH14J069623 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +8.1 8142 3.7 SP1 SMARCE1 TCF7L2 ETV6 HLF TEAD4 POLR2A CBFA2T2 MLLT1 ZNF687 ENSG00000273797 SUSD6 piR-35674-143
GH14J069647 Promoter/Enhancer 1.9 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +34.4 34430 8.7 RBPJ SMARCE1 ATF1 ETV6 L3MBTL2 MNT TEAD4 ELF3 SP1 MAFK SUSD6 SRSF5 DCAF5 piR-35674-143 ENSG00000273797
GH14J069634 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.3 +20.4 20423 6.1 MLX RBPJ NR2F1 NR2F6 HLF RERE SP1 CEBPG CBFA2T2 TFE3 SUSD6 SRSF5 DCAF5 ENSG00000273797 piR-35674-143
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000273797 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000273797 Gene

Genomic Locations for ENSG00000273797 Gene
chr14:69,617,122-69,617,648
(GRCh38/hg38)
Size:
527 bases
Orientation:
Plus strand

Genomic View for ENSG00000273797 Gene

Genes around ENSG00000273797 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000273797 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000273797 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000273797 Gene

Proteins for ENSG00000273797 Gene

Post-translational modifications for ENSG00000273797 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000273797 Gene

Domains & Families for ENSG00000273797 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000273797 Gene

Function for ENSG00000273797 Gene

Phenotypes From GWAS Catalog for ENSG00000273797 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000273797 Gene

Localization for ENSG00000273797 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000273797 Gene

Pathways & Interactions for ENSG00000273797 Gene

PathCards logo

SuperPathways for ENSG00000273797 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000273797 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000273797 Gene

Drugs & Compounds for ENSG00000273797 Gene

No Compound Related Data Available

Transcripts for ENSG00000273797 Gene

mRNA/cDNA for ENSG00000273797 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000273797 Gene

No ASD Table

Relevant External Links for ENSG00000273797 Gene

GeneLoc Exon Structure for
ENSG00000273797

Expression for ENSG00000273797 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000273797 Gene

Orthologs for ENSG00000273797 Gene

Evolution for ENSG00000273797 Gene

ENSEMBL:
Gene Tree for ENSG00000273797 (if available)
TreeFam:
Gene Tree for ENSG00000273797 (if available)

No data available for Orthologs for ENSG00000273797 Gene

Paralogs for ENSG00000273797 Gene

No data available for Paralogs for ENSG00000273797 Gene

Variants for ENSG00000273797 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000273797 Gene

Disorders for ENSG00000273797 Gene

No disorders were found for ENSG00000273797 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000273797 Gene

Publications for ENSG00000273797 Gene

No publications were found for ENSG00000273797 Gene.

No data available for External Links for ENSG00000273797 Gene

Products for ENSG00000273797 Gene

Sources for ENSG00000273797 Gene