Aliases for ENSG00000273483 Gene

Subcategory (RNA class) for ENSG00000273483 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for ENSG00000273483 Gene

  • Novel Transcript, Antisense To WNT2B 5
  • AL354760.1 5
  • Lnc-ST7L-4 165

External Ids for ENSG00000273483 Gene

Previous GeneCards Identifiers for ENSG00000273483 Gene

  • GC01M113060

Summaries for ENSG00000273483 Gene

GeneCards Summary for ENSG00000273483 Gene

ENSG00000273483 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000273483 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000273483 Gene

Genomics for ENSG00000273483 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000273483 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J112519 Enhancer 0.3 Ensembl 600.7 -1.9 -1860 0.6 CEBPB ENSG00000273483 ST7L CTTNBP2NL ENSG00000238761 MOV10 ENSG00000225075 CAPZA1 piR-54286 WNT2B
GH01J112516 Enhancer 0.3 Ensembl 600.7 +1.5 1540 0.2 PRDM4 ENSG00000273483 piR-55037 piR-51277 WNT2B CAPZA1
GH01J111990 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 10.9 +528.1 528143 4.2 CREB1 CTCF PRDM10 ZNF692 TARDBP FOXA1 RFX1 ZNF776 ZIC2 ZSCAN4 LINC01750 KCND3 lnc-FAM212B-4 ENSG00000243960 ST7L DDX20 CEPT1 DRAM2 MOV10 SLC16A1-AS1
GH01J111718 Enhancer 1.1 Ensembl ENCODE dbSUPER 10.9 +795.8 795782 8.9 GATAD2A PRDM10 KDM1A ZIC2 ZSCAN4 PATZ1 GABPA ZNF341 PKNOX1 CEBPA DDX20 RAP1A INKA2 ENSG00000273483 OVGP1 INKA2-AS1 LINC01160 lnc-KCND3-3 lnc-DDX20-6 lnc-FAM212B-2
GH01J113307 Enhancer 1 Ensembl ENCODE 10.9 -789.7 -789698 1.5 PRDM10 ZNF629 ZNF692 PRDM1 ZSCAN4 PATZ1 ZNF747 CEBPA ZNF148 SOX13 LRIG2 ST7L ENSG00000232499 ENSG00000273483 RSBN1 MAGI3 CTTNBP2NL LRIG2-DT WNT2B AP4B1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000273483 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000273483 Gene

Genomic Locations for ENSG00000273483 Gene
chr1:112,517,799-112,518,441
(GRCh38/hg38)
Size:
643 bases
Orientation:
Minus strand
chr1:113,060,421-113,061,063
(GRCh37/hg19)
Size:
643 bases
Orientation:
Minus strand

Genomic View for ENSG00000273483 Gene

Genes around ENSG00000273483 on UCSC Golden Path with GeneCards custom track
ENSG00000273483 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000273483 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000273483 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000273483 Gene

Proteins for ENSG00000273483 Gene

Post-translational modifications for ENSG00000273483 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000273483 Gene

Domains & Families for ENSG00000273483 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000273483 Gene

Function for ENSG00000273483 Gene

Phenotypes From GWAS Catalog for ENSG00000273483 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000273483 Gene

Localization for ENSG00000273483 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000273483 Gene

Pathways & Interactions for ENSG00000273483 Gene

PathCards logo

SuperPathways for ENSG00000273483 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000273483 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000273483 Gene

Drugs & Compounds for ENSG00000273483 Gene

No Compound Related Data Available

Transcripts for ENSG00000273483 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000273483 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000525FE3_9606 lncRNA 643 2

Ensembl: ENST00000608357 (view in UCSC) ,

LNCipedia: lnc-ST7L-4:1,

ENSG00000273483 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000273483 Gene

No ASD Table

Relevant External Links for ENSG00000273483 Gene

GeneLoc Exon Structure for
ENSG00000273483

No data available for mRNA/cDNA for ENSG00000273483 Gene

Expression for ENSG00000273483 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000273483 Gene

Orthologs for ENSG00000273483 Gene

Evolution for ENSG00000273483 Gene

ENSEMBL:
Gene Tree for ENSG00000273483 (if available)
TreeFam:
Gene Tree for ENSG00000273483 (if available)

No data available for Orthologs for ENSG00000273483 Gene

Paralogs for ENSG00000273483 Gene

No data available for Paralogs for ENSG00000273483 Gene

Variants for ENSG00000273483 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000273483 Gene

Disorders for ENSG00000273483 Gene

No disorders were found for ENSG00000273483 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000273483 Gene

Publications for ENSG00000273483 Gene

No publications were found for ENSG00000273483 Gene.

No data available for Mastermind for ENSG00000273483 Gene

Products for ENSG00000273483 Gene

Sources for ENSG00000273483 Gene