Aliases for ENSG00000273384 Gene

Subcategory (RNA class) for ENSG00000273384 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000273384 Gene

  • Novel Transcript 5
  • NONHSAG003579.2 91
  • Lnc-RALGPS2-2 165
  • HSALNG0008718 164
  • AL137796.1 5

External Ids for ENSG00000273384 Gene

Summaries for ENSG00000273384 Gene

GeneCards Summary for ENSG00000273384 Gene

ENSG00000273384 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000273384 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000273384 Gene

Genomics for ENSG00000273384 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000273384 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J178649 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 600.7 +0.2 153 4.1 RFX1 FOXA2 FOSL2 POLR2A HNF4A FOS SMARCA4 JUND NR2F6 ZNF384 ENSG00000273384 lnc-CLEC20A-4 RALGPS2 C1orf220 TEX35 ANGPTL1 MIR4424
GH01J178655 Enhancer 0.9 Ensembl ENCODE 0.7 +4.5 4495 1.6 CEBPG CREB1 ZHX2 FOXA1 ATF7 SCRT2 CTBP1 CEBPB JUN ZNF217 C1orf220 RALGPS2 ENSG00000273384 MIR4424 TEX35
GH01J178664 Promoter/Enhancer 1 EPDnew Ensembl ENCODE 0.4 +13.8 13795 3.8 YY1 CEBPB TCF12 NBN CEBPG SPI1 POLR2A RAD51 CTCF RALGPS2 C1orf220 CLEC20A ENSG00000273384 MIR4424 TEX35
GH01J178660 Enhancer 0.7 ENCODE 0.4 +8.2 8235 0.2 BACH1 RELA IKZF2 RCOR1 TRIM22 PKNOX1 ARID3A DPF2 RELB RUNX3 RALGPS2 ENSG00000273384 MIR4424 TEX35
GH01J178659 Enhancer 0.6 ENCODE 0.4 +7.9 7935 0.2 IKZF2 DPF2 RELB CBFB ARNT JUNB STAT5A TBX21 MTA2 MTA3 ENSG00000273384 MIR4424 RALGPS2 TEX35
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000273384 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000273384 Gene

Genomic Locations for ENSG00000273384 Gene
chr1:178,651,706-178,662,507
(GRCh38/hg38)
Size:
10,802 bases
Orientation:
Plus strand
chr1:178,620,841-178,621,417
(GRCh37/hg19)
Size:
577 bases
Orientation:
Plus strand

Genomic View for ENSG00000273384 Gene

Genes around ENSG00000273384 on UCSC Golden Path with GeneCards custom track
ENSG00000273384 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000273384 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000273384 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000273384 Gene

Proteins for ENSG00000273384 Gene

Post-translational modifications for ENSG00000273384 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000273384 Gene

Domains & Families for ENSG00000273384 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000273384 Gene

Function for ENSG00000273384 Gene

Phenotypes From GWAS Catalog for ENSG00000273384 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000273384 Gene

Localization for ENSG00000273384 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000273384 Gene

Pathways & Interactions for ENSG00000273384 Gene

PathCards logo

SuperPathways for ENSG00000273384 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000273384 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000273384 Gene

Drugs & Compounds for ENSG00000273384 Gene

No Compound Related Data Available

Transcripts for ENSG00000273384 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000273384 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000054B1E9_9606 lncRNA 577 3

Ensembl: ENST00000608190 (view in UCSC) ,

LNCipedia: lnc-RALGPS2-2:2,

NONCODE: NONHSAT150100.1,

URS00008BAB21_9606 lncRNA 347 3

LncBook: HSALNT0018095,

LNCipedia: lnc-RALGPS2-2:1,

NONCODE: NONHSAT007830.2,

URS00009C58DD_9606 lncRNA 661 2

LncBook: HSALNT0018093,

NONCODE: NONHSAT150101.1,

URS00009B1E0C_9606 lncRNA 635 2

LncBook: HSALNT0018094,

NONCODE: NONHSAT150102.1,

ENSG00000273384 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000273384 Gene

No ASD Table

Relevant External Links for ENSG00000273384 Gene

GeneLoc Exon Structure for
ENSG00000273384

No data available for mRNA/cDNA for ENSG00000273384 Gene

Expression for ENSG00000273384 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000273384 Gene

Orthologs for ENSG00000273384 Gene

Evolution for ENSG00000273384 Gene

ENSEMBL:
Gene Tree for ENSG00000273384 (if available)
TreeFam:
Gene Tree for ENSG00000273384 (if available)

No data available for Orthologs for ENSG00000273384 Gene

Paralogs for ENSG00000273384 Gene

No data available for Paralogs for ENSG00000273384 Gene

Variants for ENSG00000273384 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000273384 Gene

Disorders for ENSG00000273384 Gene

Additional Disease Information for ENSG00000273384

No disorders were found for ENSG00000273384 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000273384 Gene

Publications for ENSG00000273384 Gene

No publications were found for ENSG00000273384 Gene.

No data available for Mastermind for ENSG00000273384 Gene

Products for ENSG00000273384 Gene

Sources for ENSG00000273384 Gene