Aliases for ENSG00000273226 Gene

Subcategory (RNA class) for ENSG00000273226 Gene

lncRNA

Quality Score for this RNA gene is

12

Aliases for ENSG00000273226 Gene

  • Novel Transcript, Antisense To RPS6 5
  • Lnc-DENND4C-1 170
  • AL391834.2 5

External Ids for ENSG00000273226 Gene

Summaries for ENSG00000273226 Gene

GeneCards Summary for ENSG00000273226 Gene

ENSG00000273226 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000273226 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000273226 Gene

Genomics for ENSG00000273226 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000273226 Gene

Promoters and enhancers for ENSG00000273226 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J019374 Enhancer 0.5 ENCODE 750.6 -0.4 -383 0.6 POLR2A ZNF121 ZNF384 PRDM10 LEF1 SMAD5 SUPT5H PAF1 ENSG00000273226 HAUS6 ENSG00000272842 RF00017-7463
GH09J019376 Enhancer 0.5 Ensembl 763 -1.0 -950 0.2 POLR2A LEF1 FOXM1 SUPT5H PAF1 SMAD5 ENSG00000273226 HAUS6 ENSG00000272842 RF00017-7463
GH09J019375 Enhancer 0.3 ENCODE 765 +0.9 918 0.8 POLR2A ENSG00000273226 RPS6 piR-40494-004 RF00017-7463
GH09J019378 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 31.8 +3.9 3869 4.6 GTF3C2 ZNF785 SIN3A ZBTB40 SP1 RBPJ POLR2A ATF1 CREB1 HCFC1 RPS6 piR-40494-004 DENND4C SCARNA8 ENSG00000273226 ENSG00000272842 HAUS6 RF00017-7463
GH09J018975 Enhancer 1.1 ENCODE CraniofacialAtlas 51.3 -398.8 -398800 1.7 FOXK2 ZNF785 ZBTB6 CTBP1 ZNF362 MAX ZNF280D BCL6B ZNF384 SP7 ENSG00000273226 DENND4C HAUS6 ENSG00000272842 ENSG00000227167 ENSG00000270712 ENSG00000232176 piR-41933 lnc-HAUS6-2 SAXO1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000273226 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000273226 Gene

Genomic Locations for ENSG00000273226 Gene
chr9:19,375,451-19,375,996
(GRCh38/hg38)
Size:
546 bases
Orientation:
Plus strand
chr9:19,375,449-19,375,994
(GRCh37/hg19)
Size:
546 bases
Orientation:
Plus strand

Genomic View for ENSG00000273226 Gene

Genes around ENSG00000273226 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000273226 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000273226 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000273226 Gene

Proteins for ENSG00000273226 Gene

Post-translational modifications for ENSG00000273226 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000273226 Gene

Domains & Families for ENSG00000273226 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000273226 Gene

Function for ENSG00000273226 Gene

Phenotypes From GWAS Catalog for ENSG00000273226 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000273226 Gene

Localization for ENSG00000273226 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000273226 Gene

Pathways & Interactions for ENSG00000273226 Gene

PathCards logo

SuperPathways for ENSG00000273226 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000273226 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000273226 Gene

Drugs & Compounds for ENSG00000273226 Gene

No Compound Related Data Available

Transcripts for ENSG00000273226 Gene

mRNA/cDNA for ENSG00000273226 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000273226 Gene

No ASD Table

Relevant External Links for ENSG00000273226 Gene

GeneLoc Exon Structure for
ENSG00000273226

Expression for ENSG00000273226 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000273226 Gene

Orthologs for ENSG00000273226 Gene

Evolution for ENSG00000273226 Gene

ENSEMBL:
Gene Tree for ENSG00000273226 (if available)
TreeFam:
Gene Tree for ENSG00000273226 (if available)

No data available for Orthologs for ENSG00000273226 Gene

Paralogs for ENSG00000273226 Gene

No data available for Paralogs for ENSG00000273226 Gene

Variants for ENSG00000273226 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000273226 Gene

Disorders for ENSG00000273226 Gene

No disorders were found for ENSG00000273226 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000273226 Gene

Publications for ENSG00000273226 Gene

No publications were found for ENSG00000273226 Gene.

No data available for External Links for ENSG00000273226 Gene

Products for ENSG00000273226 Gene

Sources for ENSG00000273226 Gene