Aliases for ENSG00000273110 Gene

Subcategory (RNA class) for ENSG00000273110 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000273110 Gene

  • Novel Transcript, Antisense To SHE 5
  • HSALNG0007407 167
  • AL162591.2 5
  • Lnc-IL6R-1 168

External Ids for ENSG00000273110 Gene

Previous GeneCards Identifiers for ENSG00000273110 Gene

  • GC01P154452

Summaries for ENSG00000273110 Gene

GeneCards Summary for ENSG00000273110 Gene

ENSG00000273110 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000273110 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000273110 Gene

Genomics for ENSG00000273110 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000273110 Gene

Promoters and enhancers for ENSG00000273110 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J154473 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 -2.3 -2311 7.8 CTCF ZIC2 ZBTB10 REST ZBTB25 RAD21 TRIM22 SMC3 OSR2 NR2F2 IL6R SHE UBE2Q1-AS1 UBE2Q1 TDRD10 CHRNB2 IL6R-AS1 RNU7-57P ATP8B2 SNORA58B
GH01J154483 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +5.8 5789 4 ZSCAN5C JUND FOS ZNF639 ZNF10 TRIM28 KLF7 EP300 CTBP1 ATF2 LOC101928120 ENSG00000272654 DPM3 UBE2Q1-AS1 UBE2Q1 CHRNB2 FAM189B INTS3 RNU7-57P ATP8B2
GH01J154499 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE dbSUPER 0.4 +21.1 21088 4.2 MYC USF1 ZFX GABPA HDAC2 EZH2 CEBPB REST CEBPG YY1 TDRD10 SHE IL6R GBA ENSG00000273110
GH01J154492 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +13.2 13184 2 ZBTB11 NR2F2 MEF2B NBN SPI1 EBF1 IKZF1 FOXP2 ATF2 GATA2 TDRD10 UBE2Q1-AS1 UBE2Q1 RNU7-57P ATP8B2 SHE ADAR C1orf189 GBA ENSG00000273110
GH01J154496 Enhancer 1.1 ENCODE dbSUPER 0.4 +17.0 17012 1.4 NCOR1 REST CTBP1 FOXA2 HDAC3 LEF1 NR2F2 NFIC ARNT GABPA UBE2Q1-AS1 UBE2Q1 RNU7-57P ATP8B2 ADAR C1orf189 SHE TDRD10 ENSG00000273110
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000273110 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000273110 Gene

Genomic Locations for ENSG00000273110 Gene
chr1:154,480,012-154,481,501
(GRCh38/hg38)
Size:
1,490 bases
Orientation:
Plus strand
chr1:154,452,488-154,453,977
(GRCh37/hg19)
Size:
1,490 bases
Orientation:
Plus strand

Genomic View for ENSG00000273110 Gene

Genes around ENSG00000273110 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000273110 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000273110 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000273110 Gene

Proteins for ENSG00000273110 Gene

Post-translational modifications for ENSG00000273110 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000273110 Gene

Domains & Families for ENSG00000273110 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000273110 Gene

Function for ENSG00000273110 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000273110 Gene

Localization for ENSG00000273110 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000273110 Gene

Pathways & Interactions for ENSG00000273110 Gene

PathCards logo

SuperPathways for ENSG00000273110 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000273110 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000273110 Gene

Drugs & Compounds for ENSG00000273110 Gene

No Compound Related Data Available

Transcripts for ENSG00000273110 Gene

mRNA/cDNA for ENSG00000273110 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000273110 Gene

No ASD Table

Relevant External Links for ENSG00000273110 Gene

GeneLoc Exon Structure for
ENSG00000273110

Expression for ENSG00000273110 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000273110 Gene

Orthologs for ENSG00000273110 Gene

Evolution for ENSG00000273110 Gene

ENSEMBL:
Gene Tree for ENSG00000273110 (if available)
TreeFam:
Gene Tree for ENSG00000273110 (if available)

No data available for Orthologs for ENSG00000273110 Gene

Paralogs for ENSG00000273110 Gene

No data available for Paralogs for ENSG00000273110 Gene

Variants for ENSG00000273110 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000273110 Gene

Disorders for ENSG00000273110 Gene

No disorders were found for ENSG00000273110 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000273110 Gene

Publications for ENSG00000273110 Gene

No publications were found for ENSG00000273110 Gene.

No data available for Mastermind for ENSG00000273110 Gene

Products for ENSG00000273110 Gene

Sources for ENSG00000273110 Gene