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Aliases for ENSG00000272945 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000272945 Gene

  • Novel Transcript 5
  • AL356299.2 5

External Ids for ENSG00000272945 Gene

Previous GeneCards Identifiers for ENSG00000272945 Gene

  • GC20M032869

Summaries for ENSG00000272945 Gene

GeneCards Summary for ENSG00000272945 Gene

ENSG00000272945 is an RNA Gene.

Additional gene information for ENSG00000272945 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000272945 Gene

Genomics for ENSG00000272945 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000272945 Gene

Promoters and enhancers for ENSG00000272945 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J034954 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 20.7 -669.4 -669380 2.9 ZNF473 MTA3 ZNF652 ZFX ELF3 MNT ZNF148 NKRF POLR2A MLLT1 MYH7B GSS RBM12 CPNE1 NCOA6 ERGIC3 RPL36P4 TRPC4AP ENSG00000272945 PROCR
GH20J033992 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 19 +292.4 292365 5 SP1 ZFX ELF3 MNT NKRF POLR2A MLLT1 ZNF121 CEBPG RERE RALY RALY-AS1 CDK5RAP1 ENSG00000272945 NCOA6 CBFA2T2 ZNF341 PIGU MAP1LC3A AHCY
GH20J033662 Promoter/Enhancer 1.5 Ensembl ENCODE 20.7 +622.7 622742 2.2 ELF3 MNT NKRF POLR2A GTF2F1 ZNF687 MAFK TFE3 ZBTB7A TRIM24 C20orf144 CDK5RAP1 ENSG00000272945 CBFA2T2 NECAB3 ASIP ACTL10
GH20J033400 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 12.4 +885.3 885265 2.8 ZNF652 SP1 CTCF ZFX ELF3 ZKSCAN8 MNT SIX5 NKRF POLR2A CDK5RAP1 CBFA2T2 ZNF341-AS1 ENSG00000272945 ASIP GC20P033389
GH20J035283 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10 -998.7 -998714 3.9 ZNF652 ELF3 ZFX MNT NKRF POLR2A MLLT1 RERE GTF2F1 CSDE1 EIF6 FAM83C-AS1 RBM12 RBM39 AAR2 ERGIC3 CPNE1 NCOA6 RPL36P4 PROCR
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000272945 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000272945 Gene

Genomic Locations for ENSG00000272945 Gene
chr20:34,281,632-34,286,466
(GRCh38/hg38)
Size:
4,835 bases
Orientation:
Minus strand
chr20:32,869,438-32,874,272
(GRCh37/hg19)
Size:
4,835 bases
Orientation:
Minus strand

Genomic View for ENSG00000272945 Gene

Genes around ENSG00000272945 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000272945 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000272945 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000272945 Gene

Proteins for ENSG00000272945 Gene

Post-translational modifications for ENSG00000272945 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000272945 Gene

Domains & Families for ENSG00000272945 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000272945 Gene

Function for ENSG00000272945 Gene

Phenotypes From GWAS Catalog for ENSG00000272945 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000272945 Gene

Localization for ENSG00000272945 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000272945 Gene

Pathways & Interactions for ENSG00000272945 Gene

PathCards logo

SuperPathways for ENSG00000272945 Gene

No Data Available

Interacting Proteins for ENSG00000272945 Gene

Gene Ontology (GO) - Biological Process for ENSG00000272945 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000272945 Gene

Drugs & Compounds for ENSG00000272945 Gene

No Compound Related Data Available

Transcripts for ENSG00000272945 Gene

mRNA/cDNA for ENSG00000272945 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000272945 Gene

No ASD Table

Relevant External Links for ENSG00000272945 Gene

GeneLoc Exon Structure for
ENSG00000272945

Expression for ENSG00000272945 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000272945 Gene

Orthologs for ENSG00000272945 Gene

Evolution for ENSG00000272945 Gene

ENSEMBL:
Gene Tree for ENSG00000272945 (if available)
TreeFam:
Gene Tree for ENSG00000272945 (if available)

No data available for Orthologs for ENSG00000272945 Gene

Paralogs for ENSG00000272945 Gene

No data available for Paralogs for ENSG00000272945 Gene

Variants for ENSG00000272945 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000272945 Gene

Disorders for ENSG00000272945 Gene

No disorders were found for ENSG00000272945 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000272945 Gene

Publications for ENSG00000272945 Gene

No publications were found for ENSG00000272945 Gene.

No data available for External Links for ENSG00000272945 Gene

Products for ENSG00000272945 Gene

Sources for ENSG00000272945 Gene

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