Aliases for ENSG00000272914 Gene

Data sources for ENSG00000272914 Gene:

RNA type for ENSG00000272914 Gene

lncRNA

Aliases for ENSG00000272914 Gene

External Ids for ENSG00000272914 Gene

Previous GeneCards Identifiers for ENSG00000272914 Gene

  • GC10M031122
  • GC10M030832
  • GC10M030866

Summaries for ENSG00000272914 Gene

GeneCards Summary for ENSG00000272914 Gene

ENSG00000272914 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000272914 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000272914 Gene

Genomics for ENSG00000272914 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000272914 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J030835 Enhancer 0.2 Ensembl 256.8 +0.0 31 0.8 ENSG00000272914 DDX10P1 HSALNG0077070 ZNF438 LYZL2
GH10J030834 Enhancer 0.2 Ensembl 256.8 +0.8 831 0.4 ENSG00000272914 HSALNG0077070 ZNF438 LYZL2
GH10J031696 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 4.5 -863.8 -863786 6.7 ZIC2 CEBPB ZBTB33 TAF1 SPI1 MAFK JUNB POLR2A IKZF1 SMAD5 HSALNG0077099 ENSG00000272914 DDX10P1 lnc-ZEB1-9 MACORIS ARHGAP12 LOC100505502
GH10J030825 Enhancer 0.8 Ensembl ENCODE 6.6 +7.7 7712 4.8 NCOR1 JUND NFIC ZNF341 TAL1 ZNF316 TCF12 TEAD4 DPF2 ARID1B LINC02664 ENSG00000272914 HSALNG0077070 lnc-LYZL2-10 LYZL2 ZNF438
GH10J030963 Enhancer 1 Ensembl ENCODE CraniofacialAtlas dbSUPER 4.5 -131.3 -131268 9.8 RXRA ZNF146 SPI1 HNF4A ZSCAN4 MNT NR2F2 CEBPB SP1 ZNF438 LINC02664 DDX10P1 ENSG00000272914 piR-57133-052 HSALNG0077077 LYZL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000272914 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000272914 Gene

Latest Assembly
chr10:30,830,115-30,835,632
(GRCh38/hg38)
Size:
5,518 bases
Orientation:
Minus strand

Previous Assembly
chr10:31,120,757-31,122,316
(GRCh37/hg19 by Ensembl)
Size:
1,560 bases
Orientation:
Minus strand

Genomic View for ENSG00000272914 Gene

Genes around ENSG00000272914 on UCSC Golden Path with GeneCards custom track
ENSG00000272914 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000272914 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000272914 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000272914 Gene

Proteins for ENSG00000272914 Gene

Post-translational modifications for ENSG00000272914 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000272914 Gene

Domains & Families for ENSG00000272914 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000272914 Gene

Function for ENSG00000272914 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000272914 Gene

Localization for ENSG00000272914 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000272914 Gene

Pathways & Interactions for ENSG00000272914 Gene

PathCards logo

SuperPathways for ENSG00000272914 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000272914 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000272914 Gene

Drugs & Compounds for ENSG00000272914 Gene

No Compound Related Data Available

Transcripts for ENSG00000272914 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000272914 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00004DFBE0_9606 lncRNA 1560 4

Ensembl: ENST00000608729 (view in UCSC) ,

LncBook: HSALNT0160848,

LNCipedia: lnc-LYZL2-11:3,

NONCODE: NONHSAT156842.1,

URS00008B5448_9606 lncRNA 1889 3

LncBook: HSALNT0160849,

LNCipedia: lnc-LYZL2-11:2,

NONCODE: NONHSAT012596.2,

URS00008B4490_9606 lncRNA 213 3

LncBook: HSALNT0160844,

LNCipedia: lnc-LYZL2-11:1,

NONCODE: NONHSAT012595.2,

URS0001BF24B5_9606 lncRNA 1887 1

LncBook: HSALNT0160849,

URS0001BF050C_9606 lncRNA 1560 1

LncBook: HSALNT0160848,

ENSG00000272914 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000272914 Gene

No ASD Table

Relevant External Links for ENSG00000272914 Gene

GeneLoc Exon Structure for
ENSG00000272914

No data available for mRNA/cDNA for ENSG00000272914 Gene

Expression for ENSG00000272914 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000272914 Gene

Orthologs for ENSG00000272914 Gene

Evolution for ENSG00000272914 Gene

ENSEMBL:
Gene Tree for ENSG00000272914 (if available)
TreeFam:
Gene Tree for ENSG00000272914 (if available)

No data available for Orthologs for ENSG00000272914 Gene

Paralogs for ENSG00000272914 Gene

No data available for Paralogs for ENSG00000272914 Gene

Variants for ENSG00000272914 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000272914 Gene

Disorders for ENSG00000272914 Gene

Additional Disease Information for ENSG00000272914

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000272914 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000272914 Gene

Publications for ENSG00000272914 Gene

No publications were found for ENSG00000272914 Gene.

No data available for Mastermind for ENSG00000272914 Gene

Products for ENSG00000272914 Gene

Sources for ENSG00000272914 Gene