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Aliases for ENSG00000272869 Gene

Aliases for ENSG00000272869 Gene

  • AC008575.2 5

External Ids for ENSG00000272869 Gene

Previous GeneCards Identifiers for ENSG00000272869 Gene

  • GC05P112197

Summaries for ENSG00000272869 Gene

GeneCards Summary for ENSG00000272869 Gene

ENSG00000272869 is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include 7S RNA binding. An important paralog of this gene is SRP19.

Additional gene information for ENSG00000272869 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000272869 Gene

Genomics for ENSG00000272869 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000272869 Gene

Promoters and enhancers for ENSG00000272869 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I112860 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 550.8 +0.6 551 2.3 PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 POLR2B SRP19 ENSG00000272869 YTHDC2 APC GC05P112886 XBP1P1 ENSG00000258864
GH05I112863 Enhancer 0.5 Ensembl 0.8 +2.3 2313 0.2 ZNF362 ZBTB6 FEZF1 ZNF600 ZNF18 ZBTB17 SRP19 REEP5 ENSG00000272869 GC05P112886 XBP1P1 ENSG00000258864
GH05I112848 Enhancer 1 Ensembl ENCODE 0.4 -12.8 -12836 0.5 CTCF PKNOX1 ARID4B KLF17 RAD21 RFX5 ZNF335 ZNF121 ZSCAN5C ZNF143 ENSG00000272869 SRP19 PIR62132 ENSG00000258864
GH05I112878 Enhancer 0.8 ENCODE 0.4 +17.5 17469 1.2 HDAC1 TCF12 ZNF366 ZSCAN5C FOS ATF7 RUNX3 ZEB2 MTA1 KLF16 SRP19 REEP5 APC GC05P112886 XBP1P1 ENSG00000272869
GH05I112882 Enhancer 0.7 FANTOM5 0.3 +22.1 22090 0.6 HDAC1 MEIS2 PKNOX1 MTA2 SOX6 TEAD4 TAL1 CBFA2T3 MNT TCF12 GC05P112886 XBP1P1 SRP19 REEP5 APC ENSG00000272869
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000272869 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000272869 Gene

Genomic Locations for ENSG00000272869 Gene
chr5:112,861,188-112,893,079
(GRCh38/hg38)
Size:
31,892 bases
Orientation:
Plus strand
chr5:112,196,885-112,228,776
(GRCh37/hg19)

Genomic View for ENSG00000272869 Gene

Genes around ENSG00000272869 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000272869 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000272869 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000272869 Gene

Proteins for ENSG00000272869 Gene

  • Protein details for ENSG00000272869 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    D6RBG4
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    D6RBG4

    Protein attributes for ENSG00000272869 Gene

    Size:
    43 amino acids
    Molecular mass:
    4821 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000272869 Gene

Protein Expression for ENSG00000272869 Gene

Post-translational modifications for ENSG00000272869 Gene

No Post-translational modifications

Other Protein References for ENSG00000272869 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000272869 Gene

Domains & Families for ENSG00000272869 Gene

Protein Domains for ENSG00000272869 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ENSG00000272869: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000272869 Gene

Function for ENSG00000272869 Gene

Gene Ontology (GO) - Molecular Function for ENSG00000272869 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008312 7S RNA binding IBA --
genes like me logo Genes that share ontologies with ENSG00000272869: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000272869 Gene

Localization for ENSG00000272869 Gene

Gene Ontology (GO) - Cellular Components for ENSG00000272869 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0048500 signal recognition particle IEA --
genes like me logo Genes that share ontologies with ENSG00000272869: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for ENSG00000272869 Gene

Pathways & Interactions for ENSG00000272869 Gene

SuperPathways for ENSG00000272869 Gene

No Data Available

Interacting Proteins for ENSG00000272869 Gene

Gene Ontology (GO) - Biological Process for ENSG00000272869 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA --
GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation IBA --
GO:0006617 SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition IBA --
genes like me logo Genes that share ontologies with ENSG00000272869: view

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000272869 Gene

Drugs & Compounds for ENSG00000272869 Gene

No Compound Related Data Available

Transcripts for ENSG00000272869 Gene

mRNA/cDNA for ENSG00000272869 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000272869 Gene

No ASD Table

Relevant External Links for ENSG00000272869 Gene

GeneLoc Exon Structure for
ENSG00000272869

Expression for ENSG00000272869 Gene

Protein differential expression in normal tissues from HIPED for ENSG00000272869 Gene

This gene is overexpressed in Lung (13.3), Bone marrow stromal cell (12.4), Ovary (7.9), and Pancreas (6.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for ENSG00000272869 Gene



Protein tissue co-expression partners for ENSG00000272869 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000272869 Gene

Orthologs for ENSG00000272869 Gene

This gene was present in the common ancestor of animals.

Orthologs for ENSG00000272869 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia SRP19 34
  • 27 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Srp19 34
  • 27 (a)
OneToMany
dog
(Canis familiaris)
Mammalia SRP19 34
  • 26 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 34
  • 22 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 34
  • 17 (a)
OneToMany
chicken
(Gallus gallus)
Aves -- 34
  • 23 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 34
  • 20 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii srp19 34
  • 16 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta Srp19 34
  • 14 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea F37F2.2 34
  • 11 (a)
OneToMany
Species where no ortholog for ENSG00000272869 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for ENSG00000272869 Gene

ENSEMBL:
Gene Tree for ENSG00000272869 (if available)
TreeFam:
Gene Tree for ENSG00000272869 (if available)

Paralogs for ENSG00000272869 Gene

Paralogs for ENSG00000272869 Gene

genes like me logo Genes that share paralogs with ENSG00000272869: view

Variants for ENSG00000272869 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000272869 Gene

Disorders for ENSG00000272869 Gene

No disorders were found for ENSG00000272869 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000272869 Gene

Publications for ENSG00000272869 Gene

No publications were found for ENSG00000272869 Gene.

Products for ENSG00000272869 Gene

Sources for ENSG00000272869 Gene

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