Aliases for ENSG00000272815 Gene

Data sources for ENSG00000272815 Gene:

Subcategory (RNA class) for ENSG00000272815 Gene

lncRNA

Aliases for ENSG00000272815 Gene

External Ids for ENSG00000272815 Gene

Previous GeneCards Identifiers for ENSG00000272815 Gene

  • GC17P016695
  • GC17P016789
  • GC17P016791

Summaries for ENSG00000272815 Gene

GeneCards Summary for ENSG00000272815 Gene

ENSG00000272815 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000272815 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000272815 Gene

Genomics for ENSG00000272815 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000272815 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J016785 Enhancer 0.2 Ensembl 250.7 -0.9 -887 0.4 ENSG00000272815 HSALNG0114886 USP32P1 KRT16P6 ENSG00000266302 CCDC144A TNFRSF13B
GH17J016794 Enhancer 0.4 Ensembl 0.4 +8.2 8213 3.4 NFE2 L3MBTL2 MGA KRT16P6 ENSG00000264673 ENSG00000264729 ENSG00000272815 USP32P1 ENSG00000266302 TNFRSF13B
GH17J016815 Enhancer 0.5 Ensembl 0.3 +29.5 29487 0.7 ZNF316 NFE2 CTCF PKNOX1 MAFG MAFK FOS EMSY LOC105371553 NOS2P4 ENSG00000272815 ENSG00000266302 TNFRSF13B
GH17J016792 Enhancer 0.2 Ensembl 0.4 +5.8 5813 0.2 ENSG00000264673 ENSG00000272815 USP32P1 ENSG00000264729 ENSG00000266302 TNFRSF13B
GH17J016799 Enhancer 0.2 Ensembl 0.4 +13.4 13412 0.6 KRT16P6 ENSG00000264729 ENSG00000264673 ENSG00000272815 USP32P1 ENSG00000266302 TNFRSF13B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000272815 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000272815 Gene

Latest Assembly
chr17:16,786,488-16,816,540
(GRCh38/hg38)
Size:
30,053 bases
Orientation:
Plus strand

Previous Assembly
chr17:16,691,371-16,719,854
(GRCh37/hg19 by Ensembl)
Size:
28,484 bases
Orientation:
Plus strand

Genomic View for ENSG00000272815 Gene

Genes around ENSG00000272815 on UCSC Golden Path with GeneCards custom track
ENSG00000272815 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000272815 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000272815 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000272815 Gene

Proteins for ENSG00000272815 Gene

Post-translational modifications for ENSG00000272815 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000272815 Gene

Domains & Families for ENSG00000272815 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000272815 Gene

Function for ENSG00000272815 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000272815 Gene

Localization for ENSG00000272815 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000272815 Gene

Pathways & Interactions for ENSG00000272815 Gene

PathCards logo

SuperPathways for ENSG00000272815 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000272815 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000272815 Gene

Drugs & Compounds for ENSG00000272815 Gene

No Compound Related Data Available

Transcripts for ENSG00000272815 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000272815 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00009B3882_9606 lncRNA 3243 3

Ensembl: ENST00000602730 (view in UCSC) ,

LNCipedia: lnc-CCDC144A-1:7,

NONCODE: NONHSAT146004.2,

URS00009B54E7_9606 lncRNA 1017 3

LncBook: HSALNT0237913,

LNCipedia: lnc-CCDC144A-1:2,

NONCODE: NONHSAT145999.2,

URS00009AF1DC_9606 lncRNA 740 3

LncBook: HSALNT0237918,

LNCipedia: lnc-CCDC144A-1:8,

NONCODE: NONHSAT146008.2,

URS00009C2829_9606 lncRNA 730 3

LncBook: HSALNT0237914,

LNCipedia: lnc-CCDC144A-1:3,

NONCODE: NONHSAT146000.2,

URS00009B496B_9606 lncRNA 576 3

LncBook: HSALNT0237919,

LNCipedia: lnc-CCDC144A-1:9,

NONCODE: NONHSAT146009.2,

ENSG00000272815 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000272815 Gene

No ASD Table

Relevant External Links for ENSG00000272815 Gene

GeneLoc Exon Structure for
ENSG00000272815

No data available for mRNA/cDNA for ENSG00000272815 Gene

Expression for ENSG00000272815 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000272815 Gene

Orthologs for ENSG00000272815 Gene

Evolution for ENSG00000272815 Gene

ENSEMBL:
Gene Tree for ENSG00000272815 (if available)
TreeFam:
Gene Tree for ENSG00000272815 (if available)

No data available for Orthologs for ENSG00000272815 Gene

Paralogs for ENSG00000272815 Gene

No data available for Paralogs for ENSG00000272815 Gene

Variants for ENSG00000272815 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000272815 Gene

Disorders for ENSG00000272815 Gene

Additional Disease Information for ENSG00000272815

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000272815 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000272815 Gene

Publications for ENSG00000272815 Gene

No publications were found for ENSG00000272815 Gene.

No data available for Mastermind for ENSG00000272815 Gene

Products for ENSG00000272815 Gene

Sources for ENSG00000272815 Gene