Aliases for ENSG00000272750 Gene

Subcategory (RNA class) for ENSG00000272750 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for ENSG00000272750 Gene

  • Novel Transcript, Antisense To MIA3 5
  • AL592148.3 5
  • Lnc-AIDA-1 165

External Ids for ENSG00000272750 Gene

Previous GeneCards Identifiers for ENSG00000272750 Gene

  • GC01M222832
  • GC01M222665
  • GC01M222672
  • GC01M222729

Summaries for ENSG00000272750 Gene

GeneCards Summary for ENSG00000272750 Gene

ENSG00000272750 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000272750 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000272750 Gene

Genomics for ENSG00000272750 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000272750 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J222663 Enhancer 0.2 Ensembl 610.2 -1.9 -1889 0.4 ENSG00000272750 BROX AIDA NONHSAG004386.2 MN308858 lnc-MIA3-1 MIA3
GH01J222710 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 37.5 -51.0 -50989 4.6 SP1 HNRNPL CREB1 GATAD2A PRDM10 REST ZNF629 TFE3 ZNF512 SIX5 BROX AIDA lnc-FAM177B-3 ENSG00000272750 CICP13 TAF1A CAPN2 DISP1 MIA3 FAM177B
GH01J221739 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 25.1 +919.5 919525 5.3 SP1 CREB1 ATF7 PRDM10 RFX1 IKZF1 CTCF ZNF692 POLR2A BACH1 DUSP10 CICP13 TAF1A ENSG00000272750 MN308857 HLX
GH01J222642 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 27.7 +17.3 17291 3.2 SP1 HNRNPL CREB1 GATAD2A ATF7 PRDM10 REST ZNF629 TFE3 ZNF512 LOC107985098 lnc-MIA3-1 MIA3 ENSG00000272750 BROX
GH01J223402 Enhancer 1 Ensembl ENCODE 49.6 -741.3 -741341 1.7 CREB1 ZNF629 LEF1 JUND ZNF300 PRDM1 ZNF776 ZNF24 DPF2 SOX6 NVL ENSG00000272750 CICP13 CICP5 TAF1A MIA3 CCDC185 MN309174-028 MN309174-029 CAPN8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000272750 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000272750 Gene

Genomic Locations for ENSG00000272750 Gene
chr1:222,658,867-222,661,512
(GRCh38/hg38)
Size:
2,646 bases
Orientation:
Minus strand
chr1:222,832,209-222,834,854
(GRCh37/hg19)
Size:
2,646 bases
Orientation:
Minus strand

Genomic View for ENSG00000272750 Gene

Genes around ENSG00000272750 on UCSC Golden Path with GeneCards custom track
ENSG00000272750 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000272750 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000272750 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000272750 Gene

Proteins for ENSG00000272750 Gene

Post-translational modifications for ENSG00000272750 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000272750 Gene

Domains & Families for ENSG00000272750 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000272750 Gene

Function for ENSG00000272750 Gene

Phenotypes From GWAS Catalog for ENSG00000272750 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000272750 Gene

Localization for ENSG00000272750 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000272750 Gene

Pathways & Interactions for ENSG00000272750 Gene

PathCards logo

SuperPathways for ENSG00000272750 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000272750 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000272750 Gene

Drugs & Compounds for ENSG00000272750 Gene

No Compound Related Data Available

Transcripts for ENSG00000272750 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000272750 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00007894E1_9606 lncRNA 2646 2

Ensembl: ENST00000608771 (view in UCSC) ,

LNCipedia: lnc-AIDA-1:1,

ENSG00000272750 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000272750 Gene

No ASD Table

Relevant External Links for ENSG00000272750 Gene

GeneLoc Exon Structure for
ENSG00000272750

No data available for mRNA/cDNA for ENSG00000272750 Gene

Expression for ENSG00000272750 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000272750 Gene

Orthologs for ENSG00000272750 Gene

Evolution for ENSG00000272750 Gene

ENSEMBL:
Gene Tree for ENSG00000272750 (if available)
TreeFam:
Gene Tree for ENSG00000272750 (if available)

No data available for Orthologs for ENSG00000272750 Gene

Paralogs for ENSG00000272750 Gene

No data available for Paralogs for ENSG00000272750 Gene

Variants for ENSG00000272750 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000272750 Gene

Disorders for ENSG00000272750 Gene

Additional Disease Information for ENSG00000272750

No disorders were found for ENSG00000272750 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000272750 Gene

Publications for ENSG00000272750 Gene

No publications were found for ENSG00000272750 Gene.

No data available for Mastermind for ENSG00000272750 Gene

Products for ENSG00000272750 Gene

Sources for ENSG00000272750 Gene