Aliases for ENSG00000272625 Gene

Subcategory (RNA class) for ENSG00000272625 Gene

lncRNA

Aliases for ENSG00000272625 Gene

  • Novel Transcript, Antisense To LPIN2 5
  • AP000919.3 5

External Ids for ENSG00000272625 Gene

Summaries for ENSG00000272625 Gene

GeneCards Summary for ENSG00000272625 Gene

ENSG00000272625 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000272625 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000272625 Gene

Genomics for ENSG00000272625 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000272625 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J002822 Enhancer 0.7 Ensembl 11.4 -98.2 -98165 1.2 ARHGAP35 ZNF512 IKZF1 JUND PRDM1 MTA2 MTA1 ZNF24 ZNF184 ZBTB2 SMCHD1 NDC80 ENSG00000272625 RF00017-2606 hsa-miR-5095-235 ENSG00000266049 EMILIN2
GH18J002112 Enhancer 0.6 Ensembl ENCODE 11.2 -808.7 -808706 1.7 JUND JUN MCM5 EP300 FOS SMCHD1 NDC80 ENSG00000272625 LOC105371956 L13714-209 ENSG00000263745 METTL4
GH18J003741 Enhancer 0.6 FANTOM5 11.2 +820.2 820237 0.4 CREB1 ATF7 YBX1 HES1 ZKSCAN1 TSC22D4 MCM5 ZBTB5 ZNF114 IKZF1 piR-39858-288 ENSG00000272625 DLGAP1 ENSG00000266513 TGIF1
GH18J002938 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +18.9 18923 2.9 GATAD2A REST TFE3 RXRB IRF2 SP1 CEBPA SOX13 ZBTB26 FOXA2 LPIN2 CHORDC1P4 lnc-MYOM1-6 ENSG00000272625 EMILIN2
GH18J002931 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +11.8 11792 1.9 CTCF REST RAD21 TRIM22 SMARCC2 ZNF316 BCLAF1 USF1 SMC3 RBM22 LPIN2 EMILIN2 MYOM1 CHORDC1P4 ENSG00000272625 lnc-MYOM1-6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000272625 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000272625 Gene

Genomic Locations for ENSG00000272625 Gene
chr18:2,920,966-2,921,685
(GRCh38/hg38)
Size:
720 bases
Orientation:
Plus strand
chr18:2,920,964-2,921,683
(GRCh37/hg19)
Size:
720 bases
Orientation:
Plus strand

Genomic View for ENSG00000272625 Gene

Genes around ENSG00000272625 on UCSC Golden Path with GeneCards custom track
ENSG00000272625 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000272625 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000272625 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000272625 Gene

Proteins for ENSG00000272625 Gene

Post-translational modifications for ENSG00000272625 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000272625 Gene

Domains & Families for ENSG00000272625 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000272625 Gene

Function for ENSG00000272625 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000272625 Gene

Localization for ENSG00000272625 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000272625 Gene

Pathways & Interactions for ENSG00000272625 Gene

PathCards logo

SuperPathways for ENSG00000272625 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000272625 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000272625 Gene

Drugs & Compounds for ENSG00000272625 Gene

No Compound Related Data Available

Transcripts for ENSG00000272625 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000272625 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000279ADD_9606 lncRNA 720 1

Ensembl: ENST00000608032 (view in UCSC) ,

ENSG00000272625 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000272625 Gene

No ASD Table

Relevant External Links for ENSG00000272625 Gene

GeneLoc Exon Structure for
ENSG00000272625

No data available for mRNA/cDNA for ENSG00000272625 Gene

Expression for ENSG00000272625 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000272625 Gene

Orthologs for ENSG00000272625 Gene

Evolution for ENSG00000272625 Gene

ENSEMBL:
Gene Tree for ENSG00000272625 (if available)
TreeFam:
Gene Tree for ENSG00000272625 (if available)

No data available for Orthologs for ENSG00000272625 Gene

Paralogs for ENSG00000272625 Gene

No data available for Paralogs for ENSG00000272625 Gene

Variants for ENSG00000272625 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000272625 Gene

Disorders for ENSG00000272625 Gene

Additional Disease Information for ENSG00000272625

No disorders were found for ENSG00000272625 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000272625 Gene

Publications for ENSG00000272625 Gene

No publications were found for ENSG00000272625 Gene.

No data available for Mastermind for ENSG00000272625 Gene

Products for ENSG00000272625 Gene

Sources for ENSG00000272625 Gene