Aliases for ENSG00000272405 Gene

Subcategory (RNA class) for ENSG00000272405 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000272405 Gene

  • Novel Transcript, Antisense To BCAN 5
  • NONHSAG003131 92
  • AL365181.3 5
  • Lnc-NES-2 168

External Ids for ENSG00000272405 Gene

Previous GeneCards Identifiers for ENSG00000272405 Gene

  • GC01M156612

Summaries for ENSG00000272405 Gene

GeneCards Summary for ENSG00000272405 Gene

ENSG00000272405 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000272405 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000272405 Gene

Genomics for ENSG00000272405 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000272405 Gene

Promoters and enhancers for ENSG00000272405 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J156643 Promoter/Enhancer 1.1 Ensembl ENCODE 500.7 -0.1 -113 3.6 POLR2G PRPF4 RBM25 EZH2 PCBP1 SP2 SPI1 BCOR SUPT5H EBF1 ENSG00000272405 GON4L SMG5 CCT3 BCAN LOC105371453 ENSG00000229953
GH01J156656 Promoter/Enhancer 2.4 VISTA FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11 -19.6 -19579 14.9 RXRA FOXK2 HNRNPK ZBTB40 ZNF217 CTCF SIN3A NRF1 MYC TCF12 GON4L KHDC4 RRNAD1 ENSG00000237842 LMNA PRCC MSTO2P PMF1 ISG20L2 YY1AP1
GH01J156655 Enhancer 0.6 Ensembl 6.8 -10.7 -10714 1.2 POLR2G KLF9 POLR2A RBM22 SPI1 NFE2 RCOR1 MAFG SMARCA4 AGO2 ENSG00000272405 DAP3 ENSG00000229953 LOC105371453 BCAN
GH01J156641 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 0.7 +2.8 2786 1.8 POLR2G USF1 TEAD4 ZIC2 REST ZNF263 ZBTB26 EZH2 RBM25 RBM14 BCAN ENSG00000272068 KHDC4 MSTO2P GON4L RRNAD1 PRCC ARHGEF11 YY1AP1 CCT3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000272405 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000272405 Gene

Genomic Locations for ENSG00000272405 Gene
chr1:156,641,666-156,644,887
(GRCh38/hg38)
Size:
3,222 bases
Orientation:
Minus strand
chr1:156,611,458-156,614,679
(GRCh37/hg19)
Size:
3,222 bases
Orientation:
Minus strand

Genomic View for ENSG00000272405 Gene

Genes around ENSG00000272405 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000272405 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000272405 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000272405 Gene

Proteins for ENSG00000272405 Gene

Post-translational modifications for ENSG00000272405 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000272405 Gene

Domains & Families for ENSG00000272405 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000272405 Gene

Function for ENSG00000272405 Gene

Phenotypes From GWAS Catalog for ENSG00000272405 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000272405 Gene

Localization for ENSG00000272405 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000272405 Gene

Pathways & Interactions for ENSG00000272405 Gene

PathCards logo

SuperPathways for ENSG00000272405 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000272405 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000272405 Gene

Drugs & Compounds for ENSG00000272405 Gene

No Compound Related Data Available

Transcripts for ENSG00000272405 Gene

mRNA/cDNA for ENSG00000272405 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000272405 Gene

No ASD Table

Relevant External Links for ENSG00000272405 Gene

GeneLoc Exon Structure for
ENSG00000272405

Expression for ENSG00000272405 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000272405 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000272405 Gene

This gene is overexpressed in Adrenal Gland (x5.5) and Colon - Transverse (x4.7).
genes like me logo Genes that share expression patterns with ENSG00000272405: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000272405 Gene

Orthologs for ENSG00000272405 Gene

Evolution for ENSG00000272405 Gene

ENSEMBL:
Gene Tree for ENSG00000272405 (if available)
TreeFam:
Gene Tree for ENSG00000272405 (if available)

No data available for Orthologs for ENSG00000272405 Gene

Paralogs for ENSG00000272405 Gene

No data available for Paralogs for ENSG00000272405 Gene

Variants for ENSG00000272405 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000272405 Gene

Disorders for ENSG00000272405 Gene

No disorders were found for ENSG00000272405 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000272405 Gene

Publications for ENSG00000272405 Gene

No publications were found for ENSG00000272405 Gene.

No data available for Mastermind for ENSG00000272405 Gene

Products for ENSG00000272405 Gene

Sources for ENSG00000272405 Gene