Aliases for ENSG00000272382 Gene

Data sources for ENSG00000272382 Gene:

RNA type for ENSG00000272382 Gene

lncRNA

Aliases for ENSG00000272382 Gene

External Ids for ENSG00000272382 Gene

Previous GeneCards Identifiers for ENSG00000272382 Gene

  • GC05P043034
  • GC05P043274
  • GC05P043306

Summaries for ENSG00000272382 Gene

GeneCards Summary for ENSG00000272382 Gene

ENSG00000272382 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000272382 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000272382 Gene

Genomics for ENSG00000272382 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000272382 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J043015 Promoter/Enhancer 2.2 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 -1.3 -1266 6.6 BCLAF1 SP1 ZNF207 ZNF600 ZNF580 ZMYM3 POLR2A CEBPA ZNF10 BRCA1 ENSG00000251131 ENSG00000272382 HSALNG0041488 LOC105374748 piR-35544 piR-51211 ZNF131 ANXA2R TMEM267 LOC153684
GH05J043033 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.7 +18.8 18839 11.5 BCLAF1 ZNF207 MYC ZNF654 NCOR1 IKZF1 ZNF600 ZNF580 ZNF592 ZMYM3 ZNF131 LOC153684 ENSG00000249492 TMEM267 ENSG00000248240 EEF1A1P19 ANXA2R RPL29P12 PAIP1 ENSG00000272382
GH05J043191 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 10.5 +172.9 172853 2.9 IKZF1 ZNF600 ZNF580 CEBPA ZNF223 ZIC2 ZBTB10 CEBPB ZNF639 ZNF341 NIM1K lnc-NIM1K-3 lnc-HMGCS1-3 ZNF131 TMEM267 EEF1A1P19 ENSG00000249492 RPL29P12 C5orf34 LOC153684
GH05J043553 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 10.4 +535.9 535884 4.6 IKZF1 MYC ZNF600 ZNF580 ZNF592 POLR2A BRCA1 NFIC ZBTB10 NONO PAIP1 RF00017-4151 NNT ENSG00000248240 C5orf34 EEF1A1P19 NNT-AS1 RPL29P12 ENSG00000249492 FGF10-AS1
GH05J042987 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 10 -28.2 -28204 8.9 BCLAF1 SP1 ZNF207 ZNF654 ZNF600 MYC IKZF1 SSRP1 JUND ZNF580 FLJ32255 ENSG00000286656 ENSG00000287263 LOC105374746 MN298176 piR-39907 piR-37429 ZNF131 ENSG00000249492 ENSG00000272382
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000272382 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000272382 Gene

Latest Assembly
chr5:43,020,216-43,035,130
(GRCh38/hg38)
Size:
14,915 bases
Orientation:
Plus strand

Previous Assembly
chr5:43,033,818-43,034,737
(GRCh37/hg19 by Ensembl)
Size:
920 bases
Orientation:
Plus strand

Genomic View for ENSG00000272382 Gene

Genes around ENSG00000272382 on UCSC Golden Path with GeneCards custom track
ENSG00000272382 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000272382 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000272382 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000272382 Gene

Proteins for ENSG00000272382 Gene

Post-translational modifications for ENSG00000272382 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000272382 Gene

Domains & Families for ENSG00000272382 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000272382 Gene

Function for ENSG00000272382 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000272382 Gene

Localization for ENSG00000272382 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000272382 Gene

Pathways & Interactions for ENSG00000272382 Gene

PathCards logo

SuperPathways for ENSG00000272382 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000272382 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000272382 Gene

Drugs & Compounds for ENSG00000272382 Gene

No Compound Related Data Available

Transcripts for ENSG00000272382 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000272382 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00000F054E_9606 lncRNA 921 3

Ensembl: ENST00000607830 (view in UCSC) ,

LncBook: HSALNT0087203,

LNCipedia: lnc-ZNF131-7:1,

URS0001BEC4E3_9606 lncRNA 2794 1

LncBook: HSALNT0087195,

URS0001BCD995_9606 lncRNA 2148 1

LncBook: HSALNT0087196,

URS0001BE3982_9606 lncRNA 1509 1

LncBook: HSALNT0087202,

URS0000D592E3_9606 lncRNA 949 1

LNCipedia: lnc-ZNF131-7:2,

ENSG00000272382 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000272382 Gene

No ASD Table

Relevant External Links for ENSG00000272382 Gene

GeneLoc Exon Structure for
ENSG00000272382

No data available for mRNA/cDNA for ENSG00000272382 Gene

Expression for ENSG00000272382 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000272382 Gene

Orthologs for ENSG00000272382 Gene

Evolution for ENSG00000272382 Gene

ENSEMBL:
Gene Tree for ENSG00000272382 (if available)
TreeFam:
Gene Tree for ENSG00000272382 (if available)

No data available for Orthologs for ENSG00000272382 Gene

Paralogs for ENSG00000272382 Gene

No data available for Paralogs for ENSG00000272382 Gene

Variants for ENSG00000272382 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000272382 Gene

Disorders for ENSG00000272382 Gene

Additional Disease Information for ENSG00000272382

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000272382 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000272382 Gene

Publications for ENSG00000272382 Gene

No publications were found for ENSG00000272382 Gene.

No data available for Mastermind for ENSG00000272382 Gene

Products for ENSG00000272382 Gene

Sources for ENSG00000272382 Gene