Aliases for ENSG00000272234 Gene

Subcategory (RNA class) for ENSG00000272234 Gene

lncRNA

Number of RNA Genes sources:

0 / 14

Aliases for ENSG00000272234 Gene

  • Novel Transcript, Antisense To SEPP1 5
  • AC008945.1 5

External Ids for ENSG00000272234 Gene

Summaries for ENSG00000272234 Gene

GeneCards Summary for ENSG00000272234 Gene

ENSG00000272234 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000272234 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000272234 Gene

Genomics for ENSG00000272234 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000272234 Gene

Promoters and enhancers for ENSG00000272234 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J042806 Enhancer 0.6 ENCODE 500.7 +0.0 19 0.6 POLR2G RBM22 ZFHX2 SRSF4 POLR2A AGO2 EGR2 AGO1 HNRNPL ZNF512 ENSG00000272234 CCDC152 RPL29P12 EEF1A1P19 SELENOP PPIAP77 GHR lnc-ANXA2R-8
GH05J042807 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.7 +4.4 4396 7.1 EP300 FOXK2 POLR2G NCOR1 BCLAF1 GTF2E2 TEAD4 POLR2A KDM6A TCF7 SELENOP lnc-ANXA2R-8 CCDC152 RPL29P12 EEF1A1P19 PPIAP77 ZNF131 GHR ENSG00000177738 ENSG00000272234
GH05J042756 Promoter 1.6 EPDnew Ensembl CraniofacialAtlas 0.3 -49.1 -49144 1.5 ZBTB40 ZBTB11 GABPA POLR2A HINFP TAF9B KDM5A HCFC1 ETS1 E2F6 CCDC152 NONHSAG040283.2 GHR ENSG00000272234
GH05J042772 Enhancer 0.6 Ensembl 0.3 -33.6 -33620 0.9 CUX1 EP300 ZNF316 FOS CEBPB JUN NFE2 JUND PRDM1 MAFG SELENOP PPIAP77 CCDC152 NONHSAG040283.2 ENSG00000272234
GH05J042759 Enhancer 0.5 Ensembl 0.3 -45.3 -45293 2.2 ATF2 SPI1 DACH1 ZNF547 ATF7 STAT3 CCDC152 GHR NONHSAG040283.2 ENSG00000272234
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000272234 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000272234 Gene

Genomic Locations for ENSG00000272234 Gene
chr5:42,806,394-42,806,997
(GRCh38/hg38)
Size:
604 bases
Orientation:
Plus strand
chr5:42,806,496-42,807,099
(GRCh37/hg19)
Size:
604 bases
Orientation:
Plus strand

Genomic View for ENSG00000272234 Gene

Genes around ENSG00000272234 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000272234 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000272234 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000272234 Gene

Proteins for ENSG00000272234 Gene

Post-translational modifications for ENSG00000272234 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000272234 Gene

Domains & Families for ENSG00000272234 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000272234 Gene

Function for ENSG00000272234 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000272234 Gene

Localization for ENSG00000272234 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000272234 Gene

Pathways & Interactions for ENSG00000272234 Gene

PathCards logo

SuperPathways for ENSG00000272234 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000272234 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000272234 Gene

Drugs & Compounds for ENSG00000272234 Gene

No Compound Related Data Available

Transcripts for ENSG00000272234 Gene

mRNA/cDNA for ENSG00000272234 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000272234 Gene

No ASD Table

Relevant External Links for ENSG00000272234 Gene

GeneLoc Exon Structure for
ENSG00000272234

Expression for ENSG00000272234 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000272234 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000272234 Gene

This gene is overexpressed in Liver (x6.7) and Brain - Spinal cord (cervical c-1) (x4.7).
genes like me logo Genes that share expression patterns with ENSG00000272234: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000272234 Gene

Orthologs for ENSG00000272234 Gene

Evolution for ENSG00000272234 Gene

ENSEMBL:
Gene Tree for ENSG00000272234 (if available)
TreeFam:
Gene Tree for ENSG00000272234 (if available)

No data available for Orthologs for ENSG00000272234 Gene

Paralogs for ENSG00000272234 Gene

No data available for Paralogs for ENSG00000272234 Gene

Variants for ENSG00000272234 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000272234 Gene

Disorders for ENSG00000272234 Gene

No disorders were found for ENSG00000272234 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000272234 Gene

Publications for ENSG00000272234 Gene

No publications were found for ENSG00000272234 Gene.

No data available for Mastermind for ENSG00000272234 Gene

Products for ENSG00000272234 Gene

Sources for ENSG00000272234 Gene