Aliases for ENSG00000272205 Gene

Subcategory (RNA class) for ENSG00000272205 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for ENSG00000272205 Gene

  • Novel Transcript 5
  • Lnc-GPA33-3 165
  • AL451050.2 5

External Ids for ENSG00000272205 Gene

Summaries for ENSG00000272205 Gene

GeneCards Summary for ENSG00000272205 Gene

ENSG00000272205 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000272205 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000272205 Gene

Genomics for ENSG00000272205 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000272205 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J167219 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 -1.0 -1013 5.9 HNRNPL GATAD2A CTCF ATF7 PRDM10 ZNF629 TFE3 ZNF512 LEF1 IKZF1 POU2F1 ENSG00000272205 DUTP6 ENSG00000215835 MPZL1 piR-37170-006 CD247
GH01J167985 Enhancer 1.2 FANTOM5 Ensembl 10.9 -764.1 -764112 1.7 PRDM10 ZNF629 LEF1 IKZF1 ZNF692 JUND ZNF300 FOXA1 MTA2 ZNF776 POU2F1 MPZL1 ENSG00000272205 ADCY10 MPC2 RCSD1 MIR1255B2 DCAF6 GPR161
GH01J168112 Enhancer 0.9 Ensembl ENCODE 10.9 -891.5 -891465 4 PRDM10 IKZF1 ZNF692 ZNF174 ZNF300 PRDM1 ZNF776 ZNF501 ZNF600 PKNOX1 POU2F1 GPR161 ENSG00000272205 TBX19 MPC2 DCAF6 lnc-MPC2-1 piR-58667
GH01J167195 Enhancer 0.5 Ensembl 0.4 +23.9 23935 2 ZNF629 ZNF692 OSR2 ATF2 WT1 ZFP3 ZNF664 LINC01363 POU2F1 ENSG00000272205 GPA33
GH01J167198 Enhancer 0.5 Ensembl 0.4 +22.0 22002 1.1 RFX1 POLR2A RAD21 NFE2 SMARCA4 MAFK LINC01363 POU2F1 ENSG00000272205 GPA33
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000272205 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000272205 Gene

Genomic Locations for ENSG00000272205 Gene
chr1:167,219,831-167,220,536
(GRCh38/hg38)
Size:
706 bases
Orientation:
Minus strand
chr1:167,189,068-167,189,749
(GRCh37/hg19)
Size:
682 bases
Orientation:
Minus strand

Genomic View for ENSG00000272205 Gene

Genes around ENSG00000272205 on UCSC Golden Path with GeneCards custom track
ENSG00000272205 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000272205 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000272205 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000272205 Gene

Proteins for ENSG00000272205 Gene

Post-translational modifications for ENSG00000272205 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000272205 Gene

Domains & Families for ENSG00000272205 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000272205 Gene

Function for ENSG00000272205 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000272205 Gene

Localization for ENSG00000272205 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000272205 Gene

Pathways & Interactions for ENSG00000272205 Gene

PathCards logo

SuperPathways for ENSG00000272205 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000272205 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000272205 Gene

Drugs & Compounds for ENSG00000272205 Gene

No Compound Related Data Available

Transcripts for ENSG00000272205 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000272205 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005C69C7_9606 lncRNA 682 2

Ensembl: ENST00000606967 (view in UCSC) ,

LNCipedia: lnc-GPA33-3:1,

URS0000D599BC_9606 lncRNA 706 1

LNCipedia: lnc-GPA33-3:2,

ENSG00000272205 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000272205 Gene

No ASD Table

Relevant External Links for ENSG00000272205 Gene

GeneLoc Exon Structure for
ENSG00000272205

No data available for mRNA/cDNA for ENSG00000272205 Gene

Expression for ENSG00000272205 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000272205 Gene

genes like me logo Genes that share expression patterns with ENSG00000272205: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000272205 Gene

Orthologs for ENSG00000272205 Gene

Evolution for ENSG00000272205 Gene

ENSEMBL:
Gene Tree for ENSG00000272205 (if available)
TreeFam:
Gene Tree for ENSG00000272205 (if available)

No data available for Orthologs for ENSG00000272205 Gene

Paralogs for ENSG00000272205 Gene

No data available for Paralogs for ENSG00000272205 Gene

Variants for ENSG00000272205 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000272205 Gene

Disorders for ENSG00000272205 Gene

Additional Disease Information for ENSG00000272205

No disorders were found for ENSG00000272205 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000272205 Gene

Publications for ENSG00000272205 Gene

No publications were found for ENSG00000272205 Gene.

No data available for Mastermind for ENSG00000272205 Gene

Products for ENSG00000272205 Gene

Sources for ENSG00000272205 Gene