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Aliases for ENSG00000272141 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000272141 Gene

  • Novel Transcript 5
  • AL390719.2 5

External Ids for ENSG00000272141 Gene

Previous GeneCards Identifiers for ENSG00000272141 Gene

  • GC01P001117
  • GC01P001131
  • GC01P001172
  • GC01P001176
  • GC01P001211
  • GC01P001178
  • GC01P001181
  • GC01P001184
  • GC01P001190
  • GC01P001194
  • GC01P001197
  • GC01P001200
  • GC01P001205

Summaries for ENSG00000272141 Gene

GeneCards Summary for ENSG00000272141 Gene

ENSG00000272141 is an RNA Gene.

Additional gene information for ENSG00000272141 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000272141 Gene

Genomics for ENSG00000272141 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000272141 Gene

Promoters and enhancers for ENSG00000272141 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J001168 Enhancer 0.6 dbSUPER 600.7 -1.0 -979 0.6 HNF1A GLIS2 SOX13 GATAD2A SAP130 POLR2A GABPB1 ARID4B RARA ENSG00000272141 GC01P001208 GC01P001214 GC01P001216 GC01P001218 GC01P001219 GC01P001220 MIR200A MIR200B MIR429
GH01J001162 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 6.6 -4.9 -4904 5.3 ELF3 AHR POLR2A EGR1 CREB1 GATAD2A RXRB ZFX GTF2F1 KMT2B TTLL10 ENSG00000230092 SDF4 ENSG00000272141 GC01P001160 GC01P001214 GC01M001138
GH01J001172 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE 0.7 +4.4 4444 0.4 RFX1 RFX3 SAP130 BMI1 POLR2A MYNN TTLL10 ANKRD65 ACAP3 ENSG00000272141 TTLL10-AS1 GC01M001138
GH01J001171 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 0.7 +2.8 2798 0.9 IKZF1 IKZF2 DPF2 EED CREB1 POLR2A NR2F1 NBN EBF1 RB1 TTLL10 ANKRD65 ENSG00000272141 GC01P001160 GC01M001138
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000272141 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000272141 Gene

Genomic Locations for ENSG00000272141 Gene
chr1:1,169,357-1,170,343
(GRCh38/hg38)
Size:
987 bases
Orientation:
Plus strand
chr1:1,104,737-1,105,723
(GRCh37/hg19)
Size:
987 bases
Orientation:
Plus strand

Genomic View for ENSG00000272141 Gene

Genes around ENSG00000272141 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000272141 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000272141 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000272141 Gene

Proteins for ENSG00000272141 Gene

Post-translational modifications for ENSG00000272141 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000272141 Gene

Domains & Families for ENSG00000272141 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000272141 Gene

Function for ENSG00000272141 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000272141 Gene

Localization for ENSG00000272141 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000272141 Gene

Pathways & Interactions for ENSG00000272141 Gene

PathCards logo

SuperPathways for ENSG00000272141 Gene

No Data Available

Interacting Proteins for ENSG00000272141 Gene

Gene Ontology (GO) - Biological Process for ENSG00000272141 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000272141 Gene

Drugs & Compounds for ENSG00000272141 Gene

No Compound Related Data Available

Transcripts for ENSG00000272141 Gene

mRNA/cDNA for ENSG00000272141 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000272141 Gene

No ASD Table

Relevant External Links for ENSG00000272141 Gene

GeneLoc Exon Structure for
ENSG00000272141

Expression for ENSG00000272141 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000272141 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000272141 Gene

This gene is overexpressed in Colon - Transverse (x10.2), Pituitary (x5.6), and Stomach (x5.4).
genes like me logo Genes that share expression patterns with ENSG00000272141: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000272141 Gene

Orthologs for ENSG00000272141 Gene

Evolution for ENSG00000272141 Gene

ENSEMBL:
Gene Tree for ENSG00000272141 (if available)
TreeFam:
Gene Tree for ENSG00000272141 (if available)

No data available for Orthologs for ENSG00000272141 Gene

Paralogs for ENSG00000272141 Gene

No data available for Paralogs for ENSG00000272141 Gene

Variants for ENSG00000272141 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000272141 Gene

Disorders for ENSG00000272141 Gene

No disorders were found for ENSG00000272141 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000272141 Gene

Publications for ENSG00000272141 Gene

No publications were found for ENSG00000272141 Gene.

No data available for External Links for ENSG00000272141 Gene

Products for ENSG00000272141 Gene

Sources for ENSG00000272141 Gene

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