Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ENSG00000271949 Gene

Aliases for ENSG00000271949 Gene

  • AC093423.3 5

External Ids for ENSG00000271949 Gene

Previous GeneCards Identifiers for ENSG00000271949 Gene

  • GC01P090099

Summaries for ENSG00000271949 Gene

GeneCards Summary for ENSG00000271949 Gene

ENSG00000271949 is a Protein Coding gene. An important paralog of this gene is LRRC8C.

Additional gene information for ENSG00000271949 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000271949 Gene

Genomics for ENSG00000271949 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000271949 Gene

Promoters and enhancers for ENSG00000271949 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I089631 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 +1.7 1698 6.2 HDGF PKNOX1 ARNT ZFP64 SIN3A ZNF2 ZNF213 ZNF143 ZNF207 FOS LRRC8C ENSG00000271949 LRRC8C-DT LOC101927975 LRRC8D GBP4 GBP5 ZNF326 LRRC8B ENSG00000230735
GH01I089669 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +37.2 37235 2.1 HDGF PKNOX1 SMAD1 BMI1 BATF KLF5 IRF4 ATF7 BCLAF1 IKZF2 LRRC8C LOC101927975 LRRC8C-DT GBP4 GBP5 LRRC8D ZNF326 LRRC8B LOC100505788 GC01P089694
GH01I089672 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.3 +39.2 39209 0.3 MEIS2 PKNOX1 ATF1 JUN ZNF133 HIC1 FOSL1 NFE2 FOSL2 FOS LRRC8C LRRC8C-DT GBP4 GBP5 ZNF326 LRRC8B LRRC8D LOC100505788 GC01P089694 ENSG00000271949
GH01I089717 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +86.7 86698 4.5 SMAD1 ARNT FEZF1 ZNF2 ZNF121 ZNF213 ATF7 KLF7 RUNX3 SP3 LRRC8C LOC101927975 LRRC8C-DT LRRC8D GBP5 GC01P089694 GC01P089762 ENSG00000271949
GH01I089723 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +91.6 91610 2.8 JUN ZBTB40 BATF ZFHX2 ZNF366 ZBTB48 ETV6 FOS ZNF600 IKZF2 LOC101927975 LRRC8C LRRC8C-DT LRRC8D GBP5 ZNF326 LRRC8B GC01P089694 GC01P089762 ENSG00000271949
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000271949 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000271949 Gene

Genomic Locations for ENSG00000271949 Gene
chr1:89,633,140-89,933,250
(GRCh38/hg38)
Size:
300,111 bases
Orientation:
Plus strand
chr1:90,098,699-90,398,809
(GRCh37/hg19)

Genomic View for ENSG00000271949 Gene

Genes around ENSG00000271949 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000271949 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000271949 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000271949 Gene

Proteins for ENSG00000271949 Gene

  • Protein details for ENSG00000271949 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A6NED7
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A6NED7

    Protein attributes for ENSG00000271949 Gene

    Size:
    52 amino acids
    Molecular mass:
    6066 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000271949 Gene

Protein Expression for ENSG00000271949 Gene

Post-translational modifications for ENSG00000271949 Gene

No Post-translational modifications

Other Protein References for ENSG00000271949 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000271949 Gene

Domains & Families for ENSG00000271949 Gene

Protein Domains for ENSG00000271949 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ENSG00000271949: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000271949 Gene

Function for ENSG00000271949 Gene

Phenotypes From GWAS Catalog for ENSG00000271949 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000271949 Gene

Localization for ENSG00000271949 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000271949 Gene

Pathways & Interactions for ENSG00000271949 Gene

SuperPathways for ENSG00000271949 Gene

No Data Available

Interacting Proteins for ENSG00000271949 Gene

Gene Ontology (GO) - Biological Process for ENSG00000271949 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000271949 Gene

Drugs & Compounds for ENSG00000271949 Gene

No Compound Related Data Available

Transcripts for ENSG00000271949 Gene

mRNA/cDNA for ENSG00000271949 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000271949 Gene

No ASD Table

Relevant External Links for ENSG00000271949 Gene

GeneLoc Exon Structure for
ENSG00000271949

Expression for ENSG00000271949 Gene

Protein differential expression in normal tissues from HIPED for ENSG00000271949 Gene

This gene is overexpressed in CD8 Tcells (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for ENSG00000271949 Gene



Protein tissue co-expression partners for ENSG00000271949 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000271949 Gene

Orthologs for ENSG00000271949 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ENSG00000271949 Gene

Organism Taxonomy Gene Similarity Type Details
platypus
(Ornithorhynchus anatinus)
Mammalia -- 34
  • 77 (a)
OneToOne
Species where no ortholog for ENSG00000271949 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000271949 Gene

ENSEMBL:
Gene Tree for ENSG00000271949 (if available)
TreeFam:
Gene Tree for ENSG00000271949 (if available)

Paralogs for ENSG00000271949 Gene

Paralogs for ENSG00000271949 Gene

genes like me logo Genes that share paralogs with ENSG00000271949: view

Variants for ENSG00000271949 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000271949 Gene

Disorders for ENSG00000271949 Gene

No disorders were found for ENSG00000271949 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000271949 Gene

Publications for ENSG00000271949 Gene

No publications were found for ENSG00000271949 Gene.

Products for ENSG00000271949 Gene

Sources for ENSG00000271949 Gene

Content
Loading form....