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Aliases for ENSG00000271933 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000271933 Gene

  • AL603756.1 5

External Ids for ENSG00000271933 Gene

Previous GeneCards Identifiers for ENSG00000271933 Gene

  • GC10M085898

Summaries for ENSG00000271933 Gene

GeneCards Summary for ENSG00000271933 Gene

ENSG00000271933 is an RNA Gene.

Additional gene information for ENSG00000271933 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000271933 Gene

Genomics for ENSG00000271933 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000271933 Gene

Promoters and enhancers for ENSG00000271933 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J084137 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 664.2 +1.2 1181 4.2 FEZF1 DMAP1 YY1 E2F8 ZNF143 SP3 NFYC SSRP1 ZNF610 NBN GHITM ENSG00000271933 RPS3AP5 CDHR1 C10orf99 GC10M084047
GH10J084186 Enhancer 0.7 dbSUPER 27.3 -46.9 -46873 2 HDGF HDAC1 ZSCAN4 ZNF266 ZNF175 GLI4 CDC5L ZNF239 SRF SOX6 ENSG00000271933 RPS3AP5 CDHR1 LRIT2 GHITM GC10P084182
GH10J083983 Enhancer 0.9 ENCODE 11.1 +156.8 156787 1 PKNOX1 INSM2 FEZF1 ZEB1 GLIS2 ZNF366 ZSCAN5C SCRT2 RUNX3 EGR2 RPS3AP5 ENSG00000271933 LOC105378398 LOC105378399 RNU1-65P
GH10J084348 Enhancer 0.7 Ensembl ENCODE 14 -208.5 -208495 1.5 ZNF202 JUND ZNF362 JUN FOS ENSG00000271933 RPS3AP5 LRIT2 CCSER2 RPL12P29
GH10J084156 Enhancer 0.9 Ensembl ENCODE 5.3 -16.4 -16446 0.8 CTCF HDAC1 MEIS2 PKNOX1 JUN MAX CEBPG ZIC2 FOSL1 POLR2B CDHR1 LRIT2 RNU1-65P ENSG00000271933 C10orf99 CERNA2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000271933 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000271933 Gene

Genomic Locations for ENSG00000271933 Gene
chr10:84,138,420-84,140,582
(GRCh38/hg38)
Size:
2,163 bases
Orientation:
Minus strand
chr10:85,898,176-85,900,338
(GRCh37/hg19)
Size:
2,163 bases
Orientation:
Minus strand

Genomic View for ENSG00000271933 Gene

Genes around ENSG00000271933 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000271933 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000271933 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000271933 Gene

Proteins for ENSG00000271933 Gene

Post-translational modifications for ENSG00000271933 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000271933 Gene

Domains & Families for ENSG00000271933 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000271933 Gene

Function for ENSG00000271933 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000271933 Gene

Localization for ENSG00000271933 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000271933 Gene

Pathways & Interactions for ENSG00000271933 Gene

SuperPathways for ENSG00000271933 Gene

No Data Available

Interacting Proteins for ENSG00000271933 Gene

Gene Ontology (GO) - Biological Process for ENSG00000271933 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000271933 Gene

Drugs & Compounds for ENSG00000271933 Gene

No Compound Related Data Available

Transcripts for ENSG00000271933 Gene

mRNA/cDNA for ENSG00000271933 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000271933 Gene

No ASD Table

Relevant External Links for ENSG00000271933 Gene

GeneLoc Exon Structure for
ENSG00000271933

Expression for ENSG00000271933 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000271933 Gene

genes like me logo Genes that share expression patterns with ENSG00000271933: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000271933 Gene

Orthologs for ENSG00000271933 Gene

Evolution for ENSG00000271933 Gene

ENSEMBL:
Gene Tree for ENSG00000271933 (if available)
TreeFam:
Gene Tree for ENSG00000271933 (if available)

No data available for Orthologs for ENSG00000271933 Gene

Paralogs for ENSG00000271933 Gene

No data available for Paralogs for ENSG00000271933 Gene

Variants for ENSG00000271933 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000271933 Gene

Disorders for ENSG00000271933 Gene

No disorders were found for ENSG00000271933 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000271933 Gene

Publications for ENSG00000271933 Gene

No publications were found for ENSG00000271933 Gene.

Products for ENSG00000271933 Gene

Sources for ENSG00000271933 Gene

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