Aliases for ENSG00000271737 Gene

Subcategory (RNA class) for ENSG00000271737 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000271737 Gene

  • Novel Transcript 5
  • NONHSAG041566 92
  • AC008608.2 5
  • Lnc-TCF7-5 168

External Ids for ENSG00000271737 Gene

Previous GeneCards Identifiers for ENSG00000271737 Gene

  • GC05P133340

Summaries for ENSG00000271737 Gene

GeneCards Summary for ENSG00000271737 Gene

ENSG00000271737 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000271737 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000271737 Gene

Genomics for ENSG00000271737 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000271737 Gene

Promoters and enhancers for ENSG00000271737 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J134002 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -0.7 -658 4.9 ZNF217 EP300 SIN3A NRF1 MYC POLR2G PHF8 ZFX ZNF639 POLR2A VDAC1 ENSG00000271737 TXNDC15 C5orf24 piR-43106-167 RF00017-4885
GH05J133994 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 -9.8 -9843 2.3 JUND FOS ZIC2 TEAD1 OSR2 BCL11A CEBPB FOSL1 KAT7 SAP130 VDAC1 piR-43106-167 ENSG00000271737 RF00017-4885
GH05J133998 Enhancer 0.8 ENCODE dbSUPER 0.4 -5.1 -5144 2.9 NCOR1 ZIC2 OSR2 MYNN ZBTB17 SAP130 WRNIP1 ZNF513 POU2F2 GLIS1 ENSG00000271737 VDAC1 piR-43106-167 RF00017-4885
GH05J133996 Enhancer 0.8 ENCODE dbSUPER 0.4 -8.3 -8302 0.1 CTCF ZBTB7A TRIM22 SAP130 ELF1 ZNF654 POLR2A ETV1 ETS1 RAD21 piR-43106-167 ENSG00000271737 VDAC1 RF00017-4885
GH05J133995 Enhancer 0.8 ENCODE dbSUPER 0.4 -11.3 -11295 0 ZNF217 CUX1 NR3C1 JUND GATA3 FOXA1 MYC PAX8 DPF2 ZMYM3 piR-43106-167 ENSG00000271737 VDAC1 RF00017-4885
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000271737 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000271737 Gene

Genomic Locations for ENSG00000271737 Gene
chr5:134,005,147-134,005,562
(GRCh38/hg38)
Size:
416 bases
Orientation:
Plus strand
chr5:133,340,838-133,341,253
(GRCh37/hg19)
Size:
416 bases
Orientation:
Plus strand

Genomic View for ENSG00000271737 Gene

Genes around ENSG00000271737 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000271737 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000271737 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000271737 Gene

Proteins for ENSG00000271737 Gene

Post-translational modifications for ENSG00000271737 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000271737 Gene

Domains & Families for ENSG00000271737 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000271737 Gene

Function for ENSG00000271737 Gene

Phenotypes From GWAS Catalog for ENSG00000271737 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000271737 Gene

Localization for ENSG00000271737 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000271737 Gene

Pathways & Interactions for ENSG00000271737 Gene

PathCards logo

SuperPathways for ENSG00000271737 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000271737 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000271737 Gene

Drugs & Compounds for ENSG00000271737 Gene

No Compound Related Data Available

Transcripts for ENSG00000271737 Gene

mRNA/cDNA for ENSG00000271737 Gene

5 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
5 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000271737 Gene

No ASD Table

Relevant External Links for ENSG00000271737 Gene

GeneLoc Exon Structure for
ENSG00000271737

Expression for ENSG00000271737 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000271737 Gene

genes like me logo Genes that share expression patterns with ENSG00000271737: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000271737 Gene

Orthologs for ENSG00000271737 Gene

Evolution for ENSG00000271737 Gene

ENSEMBL:
Gene Tree for ENSG00000271737 (if available)
TreeFam:
Gene Tree for ENSG00000271737 (if available)

No data available for Orthologs for ENSG00000271737 Gene

Paralogs for ENSG00000271737 Gene

No data available for Paralogs for ENSG00000271737 Gene

Variants for ENSG00000271737 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000271737 Gene

Disorders for ENSG00000271737 Gene

No disorders were found for ENSG00000271737 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000271737 Gene

Publications for ENSG00000271737 Gene

No publications were found for ENSG00000271737 Gene.

No data available for Mastermind for ENSG00000271737 Gene

Products for ENSG00000271737 Gene

Sources for ENSG00000271737 Gene