Aliases for ENSG00000271654 Gene

Aliases for ENSG00000271654 Gene

  • SURF6 (Surfeit 6) Pseudogene 5
  • AC025062.2 5

External Ids for ENSG00000271654 Gene

Previous GeneCards Identifiers for ENSG00000271654 Gene

  • GC08M018245

Summaries for ENSG00000271654 Gene

GeneCards Summary for ENSG00000271654 Gene

ENSG00000271654 is a Pseudogene.

Additional gene information for ENSG00000271654 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000271654 Gene

Genomics for ENSG00000271654 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000271654 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J018386 Promoter/Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas 250.7 +0.5 501 1.4 CTCF GABPA HNF4A ZBTB33 TAF1 RAD21 ZNF148 ZNF143 POLR2A NR2F2 NAT2 ENSG00000271654 ENSG00000285624 lnc-PSD3-2 lnc-PSD3-5 lnc-PSD3-4 PSD3
GH08J019093 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 4.8 -707.7 -707738 4.6 FEZF1 CEBPB TAL1 PRDM6 MYC ZNF24 MAX ZNF664 GLIS1 RCOR1 HSALNG0063739 ENSG00000271654 LOC105379301 PSD3 piR-33804-104 ENSG00000253557 LOC100128993 SH2D4A
GH08J019200 Enhancer 1 FANTOM5 Ensembl ENCODE dbSUPER 4.9 -813.9 -813924 3 JUND CEBPB FOS PSD3 SH2D4A ENSG00000271654 piR-31534-643 lnc-SH2D4A-4 LOC100128993 ENSG00000253557
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000271654 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000271654 Gene

Latest Assembly
chr8:18,387,108-18,387,777
(GRCh38/hg38)
Size:
670 bases
Orientation:
Minus strand

Previous Assembly
chr8:18,244,618-18,245,287
(GRCh37/hg19 by Ensembl)
Size:
670 bases
Orientation:
Minus strand

Genomic View for ENSG00000271654 Gene

Genes around ENSG00000271654 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000271654 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000271654 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000271654 Gene

Proteins for ENSG00000271654 Gene

Post-translational modifications for ENSG00000271654 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000271654 Gene

Domains & Families for ENSG00000271654 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000271654 Gene

Function for ENSG00000271654 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000271654 Gene

Localization for ENSG00000271654 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000271654 Gene

Pathways & Interactions for ENSG00000271654 Gene

PathCards logo

SuperPathways for ENSG00000271654 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000271654 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000271654 Gene

Drugs & Compounds for ENSG00000271654 Gene

No Compound Related Data Available

Transcripts for ENSG00000271654 Gene

mRNA/cDNA for ENSG00000271654 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000271654 Gene

No ASD Table

Relevant External Links for ENSG00000271654 Gene

GeneLoc Exon Structure for
ENSG00000271654

Expression for ENSG00000271654 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000271654 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000271654 Gene

This gene is overexpressed in Liver (x19.0).
genes like me logo Genes that share expression patterns with ENSG00000271654: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000271654 Gene

Orthologs for ENSG00000271654 Gene

Evolution for ENSG00000271654 Gene

ENSEMBL:
Gene Tree for ENSG00000271654 (if available)
TreeFam:
Gene Tree for ENSG00000271654 (if available)

No data available for Orthologs for ENSG00000271654 Gene

Paralogs for ENSG00000271654 Gene

No data available for Paralogs for ENSG00000271654 Gene

Variants for ENSG00000271654 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000271654 Gene

Disorders for ENSG00000271654 Gene

No disorders were found for ENSG00000271654 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000271654 Gene

Publications for ENSG00000271654 Gene

No publications were found for ENSG00000271654 Gene.

No data available for Mastermind for ENSG00000271654 Gene

Products for ENSG00000271654 Gene

Sources for ENSG00000271654 Gene