Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ENSG00000271643 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000271643 Gene

  • AC112220.4 5

External Ids for ENSG00000271643 Gene

Summaries for ENSG00000271643 Gene

GeneCards Summary for ENSG00000271643 Gene

ENSG00000271643 is an RNA Gene.

Additional gene information for ENSG00000271643 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000271643 Gene

Genomics for ENSG00000271643 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000271643 Gene

Promoters and enhancers for ENSG00000271643 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J033795 Enhancer 0.6 FANTOM5 650.7 +0.9 913 0.3 ZNF148 SMARCE1 ZNF316 HMBOX1 EHMT2 TRIM24 ENSG00000271020 ENSG00000271324 ENSG00000271643 PDCD6IP CLASP2 GC03M033793 LOC105377023
GH03J033113 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.1 +682.2 682243 3.1 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B CRTAP GC03P033114 CNOT10 PDCD6IP GLB1 UBP1 TMPPE ENSG00000271643 ENSG00000236732 ENSG00000271020
GH03J033095 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.1 +699.9 699912 3.1 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 YY1 POLR2B ZNF207 TMPPE GLB1 CNOT10 PDCD6IP ENSG00000271643 ENSG00000236732 ENSG00000271020 CRTAP GC03P033091 GC03M033097
GH03J033790 Enhancer 1.5 FANTOM5 Ensembl ENCODE 6.5 +5.6 5629 2.5 PKNOX1 ATF1 ARNT TCF12 ZNF766 CBX5 FOS ATF7 CAVIN1 JUNB PDCD6IP CLASP2 ENSG00000271643 ENSG00000271324 LOC105377023 SDAD1P3
GH03J033914 Enhancer 0.9 dbSUPER 4.8 -118.2 -118153 1.5 PKNOX1 ATF1 ARNT TCF12 ZNF766 GATA2 ATF7 ZNF263 REST ZNF592 UBP1 PDCD6IP ENSG00000271643 ENSG00000271324 LOC105377024 GC03M034126
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000271643 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000271643 Gene

Genomic Locations for ENSG00000271643 Gene
chr3:33,795,688-33,796,950
(GRCh38/hg38)
Size:
1,263 bases
Orientation:
Minus strand
chr3:33,837,180-33,838,442
(GRCh37/hg19)
Size:
1,263 bases
Orientation:
Minus strand

Genomic View for ENSG00000271643 Gene

Genes around ENSG00000271643 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000271643 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000271643 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000271643 Gene

Proteins for ENSG00000271643 Gene

Post-translational modifications for ENSG00000271643 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000271643 Gene

Domains & Families for ENSG00000271643 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000271643 Gene

Function for ENSG00000271643 Gene

Phenotypes From GWAS Catalog for ENSG00000271643 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000271643 Gene

Localization for ENSG00000271643 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000271643 Gene

Pathways & Interactions for ENSG00000271643 Gene

SuperPathways for ENSG00000271643 Gene

No Data Available

Interacting Proteins for ENSG00000271643 Gene

Gene Ontology (GO) - Biological Process for ENSG00000271643 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000271643 Gene

Drugs & Compounds for ENSG00000271643 Gene

No Compound Related Data Available

Transcripts for ENSG00000271643 Gene

mRNA/cDNA for ENSG00000271643 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000271643 Gene

No ASD Table

Relevant External Links for ENSG00000271643 Gene

GeneLoc Exon Structure for
ENSG00000271643

Expression for ENSG00000271643 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000271643 Gene

genes like me logo Genes that share expression patterns with ENSG00000271643: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000271643 Gene

Orthologs for ENSG00000271643 Gene

Evolution for ENSG00000271643 Gene

ENSEMBL:
Gene Tree for ENSG00000271643 (if available)
TreeFam:
Gene Tree for ENSG00000271643 (if available)

No data available for Orthologs for ENSG00000271643 Gene

Paralogs for ENSG00000271643 Gene

No data available for Paralogs for ENSG00000271643 Gene

Variants for ENSG00000271643 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000271643 Gene

Disorders for ENSG00000271643 Gene

No disorders were found for ENSG00000271643 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000271643 Gene

Publications for ENSG00000271643 Gene

No publications were found for ENSG00000271643 Gene.

Products for ENSG00000271643 Gene

Sources for ENSG00000271643 Gene

Content
Loading form....