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Aliases for ENSG00000271623 Gene

Subcategory (RNA class) for ENSG00000271623 Gene

lncRNA

Aliases for ENSG00000271623 Gene

  • PRKC, Apoptosis, WT1, Regulator (PAWR) Pseudogene 5
  • AC138894.3 5

External Ids for ENSG00000271623 Gene

ORGUL Members for ENSG00000271623 Gene

Summaries for ENSG00000271623 Gene

GeneCards Summary for ENSG00000271623 Gene

ENSG00000271623 is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000271623 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000271623 Gene

Genomics for ENSG00000271623 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000271623 Gene

Promoters and enhancers for ENSG00000271623 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J028364 Promoter 0.9 Ensembl 600.7 +0.0 1 1.4 MAFK ZNF600 ZIC2 ZNF316 MGA ZBTB26 ZNF18 EMSY L3MBTL2 ENSG00000271623 LOC105369182 NPIPB6 GC16P028319
GH16J028363 Promoter 0.5 EPDnew 600.7 -1.2 -1245 0.1 ENSG00000271623 NPIPB6 LOC105369182 PIR44437 GC16P028346 GC16P028347 GC16P028348 GC16P028349 GC16P028319
GH16J028537 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 4.2 +173.7 173726 3.3 ZFX ELF3 ZNF148 POLR2A CEBPG ZSCAN21 AHR TFE3 SP7 SP1 NUPR1 SGF29 SULT1A2 TUFM ENSG00000271623 PIR42560
GH16J028882 Enhancer 0.7 Ensembl ENCODE 7 +518.5 518531 2.2 SCRT2 SCRT1 BCOR ZNF664 NBN ZMYM3 ZNF362 ENSG00000252461 GC16M028787 GC16M028881 TUFM CD19 RABEP2 NFATC2IP ENSG00000271623 ATP2A1
GH16J028356 Promoter 0.5 EPDnew 0.4 -8.1 -8055 0.1 NPIPB6 ENSG00000271623 LOC105369182 GC16P028346 GC16P028347 GC16P028348 GC16P028349 PIR44437 GC16P028319
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000271623 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000271623 Gene

Genomic Locations for ENSG00000271623 Gene
chr16:28,364,700-28,365,333
(GRCh38/hg38)
Size:
634 bases
Orientation:
Plus strand
chr16:28,376,021-28,376,654
(GRCh37/hg19)
Size:
634 bases
Orientation:
Plus strand

Genomic View for ENSG00000271623 Gene

Genes around ENSG00000271623 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000271623 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000271623 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000271623 Gene

Proteins for ENSG00000271623 Gene

Post-translational modifications for ENSG00000271623 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000271623 Gene

Domains & Families for ENSG00000271623 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000271623 Gene

Function for ENSG00000271623 Gene

Phenotypes From GWAS Catalog for ENSG00000271623 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000271623 Gene

Localization for ENSG00000271623 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000271623 Gene

Pathways & Interactions for ENSG00000271623 Gene

PathCards logo

SuperPathways for ENSG00000271623 Gene

No Data Available

Interacting Proteins for ENSG00000271623 Gene

Gene Ontology (GO) - Biological Process for ENSG00000271623 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000271623 Gene

Drugs & Compounds for ENSG00000271623 Gene

No Compound Related Data Available

Transcripts for ENSG00000271623 Gene

mRNA/cDNA for ENSG00000271623 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000271623 Gene

No ASD Table

Relevant External Links for ENSG00000271623 Gene

GeneLoc Exon Structure for
ENSG00000271623

Expression for ENSG00000271623 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000271623 Gene

genes like me logo Genes that share expression patterns with ENSG00000271623: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000271623 Gene

Orthologs for ENSG00000271623 Gene

Evolution for ENSG00000271623 Gene

ENSEMBL:
Gene Tree for ENSG00000271623 (if available)
TreeFam:
Gene Tree for ENSG00000271623 (if available)

No data available for Orthologs for ENSG00000271623 Gene

Paralogs for ENSG00000271623 Gene

No data available for Paralogs for ENSG00000271623 Gene

Variants for ENSG00000271623 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000271623 Gene

Disorders for ENSG00000271623 Gene

No disorders were found for ENSG00000271623 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000271623 Gene

Publications for ENSG00000271623 Gene

No publications were found for ENSG00000271623 Gene.

No data available for External Links for ENSG00000271623 Gene

Products for ENSG00000271623 Gene

Sources for ENSG00000271623 Gene

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