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Aliases for ENSG00000271553 Gene

Subcategory (RNA class) for ENSG00000271553 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000271553 Gene

  • AC018638.7 5

External Ids for ENSG00000271553 Gene

ORGUL Members for ENSG00000271553 Gene

Previous GeneCards Identifiers for ENSG00000271553 Gene

  • GC07P128450
  • GC07P128501

Summaries for ENSG00000271553 Gene

GeneCards Summary for ENSG00000271553 Gene

ENSG00000271553 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000271553 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000271553 Gene

Genomics for ENSG00000271553 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000271553 Gene

Promoters and enhancers for ENSG00000271553 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J129053 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 30.7 +387.8 387762 2.9 CLOCK ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 TNPO3 GC07P129056 TPI1P2 ENSG00000243679 ENSG00000242588 ENSG00000243302 ENSG00000230715 NRF1 RPS10P15 ENSG00000229413
GH07J128403 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE 16 -259.8 -259846 7.3 HDGF ARNT ZFP64 SIN3A DMAP1 ZNF2 YY1 POLR2B ZNF766 E2F8 IMPDH1 PIR61424 ENSG00000273270 ENSG00000271553 ENSG00000242588 PRRT4 ENSG00000230715 LRRC4 RBM28 HILPDA
GH07J128826 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.4 +165.4 165392 11.9 HDGF PKNOX1 SMAD1 FOXA2 ARNT SIN3A POLR2B E2F8 FOS ZNF263 FLNC ENSG00000243679 ENSG00000230715 ENSG00000243302 NRF1 ENSG00000229413 ENSG00000271553 ENSG00000242588 TNPO3 CCDC136
GH07J128782 Enhancer 1.2 Ensembl ENCODE 24 +116.2 116244 1.3 HDGF HNRNPUL1 PKNOX1 SMAD1 ARNT ZFP64 SIN3A ZNF2 YY1 ZNF766 TRP-AGG2-3 ENSG00000243302 ENSG00000242588 ENSG00000230715 ENSG00000243679 CDC26P1 ENSG00000229413 RPS10P15 NRF1 RBM28
GH07J128737 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 9.9 +73.7 73660 6.6 HDGF HNRNPUL1 PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 CALU ENSG00000243302 ENSG00000230715 ENSG00000243679 ENSG00000242588 TNPO3 RPS10P15 ENSG00000229413 CDC26P1 OPN1SW
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000271553 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000271553 Gene

Genomic Locations for ENSG00000271553 Gene
chr7:128,667,043-128,668,156
(GRCh38/hg38)
Size:
1,114 bases
Orientation:
Plus strand
chr7:128,307,097-128,308,210
(GRCh37/hg19)
Size:
1,114 bases
Orientation:
Plus strand

Genomic View for ENSG00000271553 Gene

Genes around ENSG00000271553 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000271553 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000271553 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000271553 Gene

Proteins for ENSG00000271553 Gene

Post-translational modifications for ENSG00000271553 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000271553 Gene

Domains & Families for ENSG00000271553 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000271553 Gene

Function for ENSG00000271553 Gene

Phenotypes From GWAS Catalog for ENSG00000271553 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000271553 Gene

Localization for ENSG00000271553 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000271553 Gene

Pathways & Interactions for ENSG00000271553 Gene

SuperPathways for ENSG00000271553 Gene

No Data Available

Interacting Proteins for ENSG00000271553 Gene

Gene Ontology (GO) - Biological Process for ENSG00000271553 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000271553 Gene

Drugs & Compounds for ENSG00000271553 Gene

No Compound Related Data Available

Transcripts for ENSG00000271553 Gene

mRNA/cDNA for ENSG00000271553 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000271553 Gene

No ASD Table

Relevant External Links for ENSG00000271553 Gene

GeneLoc Exon Structure for
ENSG00000271553

Expression for ENSG00000271553 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000271553 Gene

genes like me logo Genes that share expression patterns with ENSG00000271553: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000271553 Gene

Orthologs for ENSG00000271553 Gene

Evolution for ENSG00000271553 Gene

ENSEMBL:
Gene Tree for ENSG00000271553 (if available)
TreeFam:
Gene Tree for ENSG00000271553 (if available)

No data available for Orthologs for ENSG00000271553 Gene

Paralogs for ENSG00000271553 Gene

No data available for Paralogs for ENSG00000271553 Gene

Variants for ENSG00000271553 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000271553 Gene

Disorders for ENSG00000271553 Gene

No disorders were found for ENSG00000271553 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000271553 Gene

Publications for ENSG00000271553 Gene

No publications were found for ENSG00000271553 Gene.

Products for ENSG00000271553 Gene

Sources for ENSG00000271553 Gene

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