Aliases for ENSG00000271522 Gene

Subcategory (RNA class) for ENSG00000271522 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000271522 Gene

  • Novel Transcript 5
  • NONHSAG048813 94
  • AC016831.6 5
  • Lnc-MEST-7 170

External Ids for ENSG00000271522 Gene

Previous GeneCards Identifiers for ENSG00000271522 Gene

  • GC07P130474

Summaries for ENSG00000271522 Gene

GeneCards Summary for ENSG00000271522 Gene

ENSG00000271522 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000271522 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000271522 Gene

Genomics for ENSG00000271522 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000271522 Gene

Promoters and enhancers for ENSG00000271522 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J130789 Enhancer 0.2 Ensembl 750.6 -0.6 -607 0.4 ENSG00000271522 KLF14 LOC105375508
GH07J130069 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 10.2 -719.3 -719255 3.7 SIN3A ZBTB40 SP1 CTCF MLX RBPJ SMARCE1 POLR2A USF2 NR2F6 KLHDC10 NRF1 TMEM209 ENSG00000238072 ENSG00000270953 COPG2 ENSG00000271522 KLF14 CEP41 ENSG00000229196
GH07J131071 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 10.2 +282.2 282211 2 CTCF SIX5 HLF RAD21 TEAD4 ZFX SP1 BACH1 SMARCA4 TRIM24 MKLN1 ENSG00000271522 RF00017-6630 piR-47628-178 lnc-MKLN1-1 ENSG00000285106 LINC-PINT
GH07J130733 Promoter/Enhancer 1.1 Ensembl ENCODE 0.2 -55.5 -55508 3 CTCF ZBTB6 ZNF362 L3MBTL2 ZNF148 NCOA6 PRDM1 EGR1 GMEB1 GLIS2 LOC105375508 KLF14 CPA2 CPA5 lnc-MEST-5 ENSG00000271522
GH07J130758 Enhancer 0.5 ENCODE 0.3 -31.6 -31571 0.2 CTCF RAD21 REST TRIM22 ZNF766 SMC3 ZNF592 LOC105375508 ENSG00000271522 lnc-MEST-5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000271522 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000271522 Gene

Genomic Locations for ENSG00000271522 Gene
chr7:130,790,208-130,791,724
(GRCh38/hg38)
Size:
1,517 bases
Orientation:
Plus strand
chr7:130,474,967-130,476,483
(GRCh37/hg19)
Size:
1,517 bases
Orientation:
Plus strand

Genomic View for ENSG00000271522 Gene

Genes around ENSG00000271522 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000271522 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000271522 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000271522 Gene

Proteins for ENSG00000271522 Gene

Post-translational modifications for ENSG00000271522 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000271522 Gene

Domains & Families for ENSG00000271522 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000271522 Gene

Function for ENSG00000271522 Gene

Phenotypes From GWAS Catalog for ENSG00000271522 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000271522 Gene

Localization for ENSG00000271522 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000271522 Gene

Pathways & Interactions for ENSG00000271522 Gene

PathCards logo

SuperPathways for ENSG00000271522 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000271522 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000271522 Gene

Drugs & Compounds for ENSG00000271522 Gene

No Compound Related Data Available

Transcripts for ENSG00000271522 Gene

mRNA/cDNA for ENSG00000271522 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LNCipedia transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000271522 Gene

No ASD Table

Relevant External Links for ENSG00000271522 Gene

GeneLoc Exon Structure for
ENSG00000271522

Expression for ENSG00000271522 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000271522 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000271522 Gene

This gene is overexpressed in Brain - Anterior cingulate cortex (BA24) (x4.5), Brain - Frontal Cortex (BA9) (x4.4), and Brain - Cortex (x4.3).
genes like me logo Genes that share expression patterns with ENSG00000271522: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000271522 Gene

Orthologs for ENSG00000271522 Gene

Evolution for ENSG00000271522 Gene

ENSEMBL:
Gene Tree for ENSG00000271522 (if available)
TreeFam:
Gene Tree for ENSG00000271522 (if available)

No data available for Orthologs for ENSG00000271522 Gene

Paralogs for ENSG00000271522 Gene

No data available for Paralogs for ENSG00000271522 Gene

Variants for ENSG00000271522 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000271522 Gene

Disorders for ENSG00000271522 Gene

No disorders were found for ENSG00000271522 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000271522 Gene

Publications for ENSG00000271522 Gene

No publications were found for ENSG00000271522 Gene.

No data available for External Links for ENSG00000271522 Gene

Products for ENSG00000271522 Gene

Sources for ENSG00000271522 Gene