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Aliases for ENSG00000271366 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000271366 Gene

  • Novel Transcript 5
  • AC002128.2 5

External Ids for ENSG00000271366 Gene

Previous GeneCards Identifiers for ENSG00000271366 Gene

  • GC19M036552
  • GC19M037084

Summaries for ENSG00000271366 Gene

GeneCards Summary for ENSG00000271366 Gene

ENSG00000271366 is an RNA Gene.

Additional gene information for ENSG00000271366 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000271366 Gene

Genomics for ENSG00000271366 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000271366 Gene

Promoters and enhancers for ENSG00000271366 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J035253 Enhancer 1.2 Ensembl ENCODE dbSUPER 600.7 -0.5 -462 1.4 ELF3 CEBPG PPARG SP5 SOX13 ZIC2 CEBPA GATAD2A RXRB RCOR2 ENSG00000271366 LSR FAM187B ZNF599 TMEM147-AS1 ENSG00000233214 FXYD3 FFAR2 ZNF302 CD22
GH19J035255 Enhancer 0.8 Ensembl ENCODE dbSUPER 600.7 -1.9 -1916 1.5 POLR2A ZNF664 ENSG00000271366 LSR MAG FAM187B ENSG00000233214 FXYD3 FFAR2 LOC105372380
GH19J034905 Enhancer 0.5 Ensembl 5.1 +345.5 345538 5.8 EZH2 ATF2 ZBTB33 POLR2A CBFA2T3 GC19P037286 GC19P037306 GC19P037326 GC19P037339 PIR33654 PIR33760 PIR33849 PIR44925 PIR34071 PIR45109
GH19J035257 Enhancer 0.8 Ensembl dbSUPER 0.7 -4.1 -4062 1.4 ZNF121 SP7 ZNF24 POLR2A ZFHX2 CTCF ZFP91 GLIS1 KLF1 EGR2 LOC105372380 FAM187B MAG ENSG00000233214 FXYD3 FFAR2 CD22 LSR ENSG00000271366
GH19J035258 Enhancer 0.2 dbSUPER 0.4 -5.4 -5408 0.7 LOC105372380 FAM187B ENSG00000233214 FXYD3 FFAR2 ENSG00000271366 LSR
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000271366 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000271366 Gene

Genomic Locations for ENSG00000271366 Gene
chr19:35,251,440-35,253,639
(GRCh38/hg38)
Size:
2,200 bases
Orientation:
Minus strand
chr19:35,742,343-35,744,542
(GRCh37/hg19)
Size:
2,200 bases
Orientation:
Minus strand

Genomic View for ENSG00000271366 Gene

Genes around ENSG00000271366 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000271366 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000271366 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000271366 Gene

Proteins for ENSG00000271366 Gene

Post-translational modifications for ENSG00000271366 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000271366 Gene

Domains & Families for ENSG00000271366 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000271366 Gene

Function for ENSG00000271366 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000271366 Gene

Localization for ENSG00000271366 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000271366 Gene

Pathways & Interactions for ENSG00000271366 Gene

PathCards logo

SuperPathways for ENSG00000271366 Gene

No Data Available

Interacting Proteins for ENSG00000271366 Gene

Gene Ontology (GO) - Biological Process for ENSG00000271366 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000271366 Gene

Drugs & Compounds for ENSG00000271366 Gene

No Compound Related Data Available

Transcripts for ENSG00000271366 Gene

mRNA/cDNA for ENSG00000271366 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000271366 Gene

No ASD Table

Relevant External Links for ENSG00000271366 Gene

GeneLoc Exon Structure for
ENSG00000271366

Expression for ENSG00000271366 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000271366 Gene

genes like me logo Genes that share expression patterns with ENSG00000271366: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000271366 Gene

Orthologs for ENSG00000271366 Gene

Evolution for ENSG00000271366 Gene

ENSEMBL:
Gene Tree for ENSG00000271366 (if available)
TreeFam:
Gene Tree for ENSG00000271366 (if available)

No data available for Orthologs for ENSG00000271366 Gene

Paralogs for ENSG00000271366 Gene

No data available for Paralogs for ENSG00000271366 Gene

Variants for ENSG00000271366 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000271366 Gene

Disorders for ENSG00000271366 Gene

No disorders were found for ENSG00000271366 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000271366 Gene

Publications for ENSG00000271366 Gene

No publications were found for ENSG00000271366 Gene.

No data available for External Links for ENSG00000271366 Gene

Products for ENSG00000271366 Gene

Sources for ENSG00000271366 Gene

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