Aliases for ENSG00000271155 Gene

Subcategory (RNA class) for ENSG00000271155 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for ENSG00000271155 Gene

  • Novel Transcript, Antisense To PTCH1 5
  • NONHSAG052935.2 91
  • AL161729.1 5

External Ids for ENSG00000271155 Gene

Previous GeneCards Identifiers for ENSG00000271155 Gene

  • GC09P098269

Summaries for ENSG00000271155 Gene

GeneCards Summary for ENSG00000271155 Gene

ENSG00000271155 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000271155 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000271155 Gene

Genomics for ENSG00000271155 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000271155 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J095503 Promoter/Enhancer 3 VISTA EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 53.8 +4.5 4538 14.3 SP1 HNRNPL CREB1 GATAD2A TEAD4 PRDM10 ZNF629 TFE3 ZNF512 RFX1 PTCH1 ERCC6L2 ENSG00000271155 LINC00476 EIF4BP3 ENSG00000271659 ENSG00000223849 ENSG00000237212 NSA2P7 ENSG00000236095
GH09J096416 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 27.5 +912.5 912502 5.9 SP1 HNRNPL CREB1 GATAD2A ATF7 TEAD4 PRDM10 ZNF629 REST TFE3 ENSG00000286835 ZNF367 lnc-HABP4-8 piR-50584 ERCC6L2 ZNF322P1 ENSG00000271155 ZNF782 EIF4BP3 ENSG00000254633
GH09J094692 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas 54.4 -812.7 -812666 2.9 GATAD2A TEAD4 PRDM10 ZNF692 RCOR2 ZNF300 PRDM1 ZNF776 ZSCAN4 SP1 HSALNG0072935 ENSG00000271155 ENSG00000232063 ENSG00000223849 ENSG00000271659 FBP1 ZNF169 LOC107987101 lnc-C9orf3-8 AOPEP
GH09J095874 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 28.9 +369.6 369566 4.4 BRCA1 ARHGAP35 SP1 CREB1 GATAD2A TEAD4 PRDM10 ZNF629 TFE3 SIX5 ERCC6L2 LINC00476 ENSG00000271155 ENSG00000237212 ZNF510 HABP4 EIF4BP3 ENSG00000271659 FANCC RF00017-7736
GH09J095778 Enhancer 0.9 Ensembl ENCODE 29.3 +273.0 273036 1 GATAD2A CEBPA CEBPB ZNF140 ZNF266 ZNF623 ZBTB11 CEBPG ZNF335 ZNF530 ENSG00000271155 ERCC6L2 LINC00476 ZNF510 ENSG00000271659 ENSG00000233820 ENSG00000237212 PTCH1 ENSG00000268926 LOC112268049
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000271155 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000271155 Gene

Genomic Locations for ENSG00000271155 Gene
chr9:95,506,235-95,507,636
(GRCh38/hg38)
Size:
1,402 bases
Orientation:
Plus strand
chr9:98,268,517-98,269,918
(GRCh37/hg19)
Size:
1,402 bases
Orientation:
Plus strand

Genomic View for ENSG00000271155 Gene

Genes around ENSG00000271155 on UCSC Golden Path with GeneCards custom track
ENSG00000271155 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000271155 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000271155 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000271155 Gene

Proteins for ENSG00000271155 Gene

Post-translational modifications for ENSG00000271155 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000271155 Gene

Domains & Families for ENSG00000271155 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000271155 Gene

Function for ENSG00000271155 Gene

Phenotypes From GWAS Catalog for ENSG00000271155 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000271155 Gene

Localization for ENSG00000271155 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000271155 Gene

Pathways & Interactions for ENSG00000271155 Gene

PathCards logo

SuperPathways for ENSG00000271155 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000271155 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000271155 Gene

Drugs & Compounds for ENSG00000271155 Gene

No Compound Related Data Available

Transcripts for ENSG00000271155 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000271155 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005A7842_9606 lncRNA 1402 2

Ensembl: ENST00000604104 (view in UCSC) ,

NONCODE: NONHSAT133379.2,

ENSG00000271155 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000271155 Gene

No ASD Table

Relevant External Links for ENSG00000271155 Gene

GeneLoc Exon Structure for
ENSG00000271155

No data available for mRNA/cDNA for ENSG00000271155 Gene

Expression for ENSG00000271155 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000271155 Gene

genes like me logo Genes that share expression patterns with ENSG00000271155: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000271155 Gene

Orthologs for ENSG00000271155 Gene

Evolution for ENSG00000271155 Gene

ENSEMBL:
Gene Tree for ENSG00000271155 (if available)
TreeFam:
Gene Tree for ENSG00000271155 (if available)

No data available for Orthologs for ENSG00000271155 Gene

Paralogs for ENSG00000271155 Gene

No data available for Paralogs for ENSG00000271155 Gene

Variants for ENSG00000271155 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000271155 Gene

Disorders for ENSG00000271155 Gene

Additional Disease Information for ENSG00000271155

No disorders were found for ENSG00000271155 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000271155 Gene

Publications for ENSG00000271155 Gene

No publications were found for ENSG00000271155 Gene.

No data available for Mastermind for ENSG00000271155 Gene

Products for ENSG00000271155 Gene

Sources for ENSG00000271155 Gene