Aliases for ENSG00000271100 Gene

Aliases for ENSG00000271100 Gene

  • ATPase, H+ Transporting, Lysosomal 56/58kDa, V1 Subunit B2, Pseudogene 5
  • AP000753.3 5

External Ids for ENSG00000271100 Gene

Previous GeneCards Identifiers for ENSG00000271100 Gene

  • GC11M063466

Summaries for ENSG00000271100 Gene

GeneCards Summary for ENSG00000271100 Gene

ENSG00000271100 is a Pseudogene.

Additional gene information for ENSG00000271100 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000271100 Gene

Genomics for ENSG00000271100 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000271100 Gene

Promoters and enhancers for ENSG00000271100 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J063697 Enhancer 0.8 Ensembl dbSUPER 750.6 -0.3 -292 2.5 GATA3 SREBF1 ZNF217 MNT PRDM1 CREB1 CTBP1 OSR2 ESRRA DPF2 ENSG00000271100 RF00017-937 ATL3 ENSG00000256789 SPINDOC PLAAT3 RTN3 piR-56497-021
GH11J063710 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -10.7 -10736 4.2 ZNF121 TEAD4 ZKSCAN8 IKZF1 RFX1 REST HDAC1 ZBTB20 CTBP1 OSR2 ATL3 ENSG00000271100 piR-56497-021 RTN3
GH11J063720 Enhancer 0.5 Ensembl dbSUPER 0.3 -21.3 -21337 0.2 SCRT1 NFIC RTN3 ENSG00000256789 piR-56497-021 ENSG00000271100
GH11J063713 Enhancer 0.4 Ensembl dbSUPER 0.4 -17.0 -17036 0.4 KDM1A ATL3 RTN3 ENSG00000203520 PLAAT3 ENSG00000271100 piR-56497-021
GH11J063703 Enhancer 0.3 Ensembl 0.4 -6.2 -6236 2.4 PRDM6 ENSG00000271100 RTN3 piR-56497-021
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000271100 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000271100 Gene

Genomic Locations for ENSG00000271100 Gene
chr11:63,698,596-63,698,764
(GRCh38/hg38)
Size:
169 bases
Orientation:
Minus strand
chr11:63,466,068-63,466,236
(GRCh37/hg19)
Size:
169 bases
Orientation:
Minus strand

Genomic View for ENSG00000271100 Gene

Genes around ENSG00000271100 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000271100 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000271100 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000271100 Gene

Proteins for ENSG00000271100 Gene

Post-translational modifications for ENSG00000271100 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000271100 Gene

Domains & Families for ENSG00000271100 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000271100 Gene

Function for ENSG00000271100 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000271100 Gene

Localization for ENSG00000271100 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000271100 Gene

Pathways & Interactions for ENSG00000271100 Gene

PathCards logo

SuperPathways for ENSG00000271100 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000271100 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000271100 Gene

Drugs & Compounds for ENSG00000271100 Gene

No Compound Related Data Available

Transcripts for ENSG00000271100 Gene

mRNA/cDNA for ENSG00000271100 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000271100 Gene

No ASD Table

Relevant External Links for ENSG00000271100 Gene

GeneLoc Exon Structure for
ENSG00000271100

Expression for ENSG00000271100 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000271100 Gene

genes like me logo Genes that share expression patterns with ENSG00000271100: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000271100 Gene

Orthologs for ENSG00000271100 Gene

Evolution for ENSG00000271100 Gene

ENSEMBL:
Gene Tree for ENSG00000271100 (if available)
TreeFam:
Gene Tree for ENSG00000271100 (if available)

No data available for Orthologs for ENSG00000271100 Gene

Paralogs for ENSG00000271100 Gene

No data available for Paralogs for ENSG00000271100 Gene

Variants for ENSG00000271100 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000271100 Gene

Disorders for ENSG00000271100 Gene

No disorders were found for ENSG00000271100 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000271100 Gene

Publications for ENSG00000271100 Gene

No publications were found for ENSG00000271100 Gene.

No data available for External Links for ENSG00000271100 Gene

Products for ENSG00000271100 Gene

Sources for ENSG00000271100 Gene