ENSG00000271100 Gene (Pseudogene)

 

GC11M063698
GIFtS:
4
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Aliases for ENSG00000271100 Gene

Aliases for ENSG00000271100 Gene

  • ATPase, H+ Transporting, Lysosomal 56/58kDa, V1 Subunit B2, Pseudogene 5
  • AP000753.3 5

External Ids for ENSG00000271100 Gene

Previous GeneCards Identifiers for ENSG00000271100 Gene

  • GC11M063466

Summaries for ENSG00000271100 Gene

GeneCards Summary for ENSG00000271100 Gene

ENSG00000271100 is a Pseudogene.

Additional gene information for ENSG00000271100 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000271100 Gene

Genomics for ENSG00000271100 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for ENSG00000271100 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J063699 Enhancer 0.8 Ensembl dbSUPER 250.7 -0.8 -837 1.2 ZNF217 MNT CUX1 CTBP1 GATA3 SMARCE1 DPF2 CREB1 OSR2 ZNF24 ENSG00000271100 ATL3 ENSG00000256789 SPINDOC PLAAT3 RTN3 piR-56497-021 ZFTA
GH11J063710 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -10.7 -10736 3.8 IKZF1 ZFP64 CTCF REST MYNN PRDM6 RAD21 SPI1 ZNF664 CEBPG ATL3 ENSG00000271100 piR-56497-021 RTN3 ZFTA
GH11J063725 Enhancer 0.6 FANTOM5 Ensembl 0.3 -27.9 -27937 4.6 SPI1 ZBTB33 L3MBTL2 ATL3 RTN3 PLAAT3 ENSG00000256789 ENSG00000203520 SPINDOC NAA40 piR-56497-021 ENSG00000271100 ZFTA
GH11J063703 Enhancer 0.4 Ensembl 0.4 -6.2 -6236 2.4 PRDM6 SPI1 BHLHE40 ZNF189 ENSG00000271100 RTN3 piR-56497-021 ZFTA
GH11J063718 Enhancer 0.5 dbSUPER 0.3 -22.5 -22456 6.1 PRDM6 ZBTB33 SCRT1 HLF NFIC ATL3 RTN3 PLAAT3 ENSG00000256789 ENSG00000203520 SPINDOC piR-56497-021 ENSG00000271100 ZFTA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000271100 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000271100 Gene

Latest Assembly
chr11:63,698,596-63,698,764
(GRCh38/hg38)
Size:
169 bases
Orientation:
Minus strand

Previous Assembly
chr11:63,466,068-63,466,236
(GRCh37/hg19 by Ensembl)
Size:
169 bases
Orientation:
Minus strand

Genomic View for ENSG00000271100 Gene

Genes around ENSG00000271100 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000271100 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000271100 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000271100 Gene

Proteins for ENSG00000271100 Gene

Products:

  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for ENSG00000271100 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000271100 Gene

Domains & Families for ENSG00000271100 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000271100 Gene

Function for ENSG00000271100 Gene

Products:

  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000271100 Gene

Localization for ENSG00000271100 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000271100 Gene

Pathways & Interactions for ENSG00000271100 Gene

PathCards logo

SuperPathways for ENSG00000271100 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000271100 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000271100 Gene

Drugs & Compounds for ENSG00000271100 Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for ENSG00000271100 Gene

Products:

  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

mRNA/cDNA for ENSG00000271100 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000271100 Gene

No ASD Table

Relevant External Links for ENSG00000271100 Gene

GeneLoc Exon Structure for
ENSG00000271100

Expression for ENSG00000271100 Gene

Products:

  1. Primer products for research

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000271100 Gene

mRNA expression in normal human tissues for ENSG00000271100 Gene
mRNA expression by GTEx for ENSG00000271100 Gene
genes like me logo Genes that share expression patterns with ENSG00000271100: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000271100 Gene

Orthologs for ENSG00000271100 Gene

Evolution for ENSG00000271100 Gene

ENSEMBL:
Gene Tree for ENSG00000271100 (if available)
TreeFam:
Gene Tree for ENSG00000271100 (if available)

No data available for Orthologs for ENSG00000271100 Gene

Paralogs for ENSG00000271100 Gene

No data available for Paralogs for ENSG00000271100 Gene

Variants for ENSG00000271100 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000271100 Gene

Disorders for ENSG00000271100 Gene

No disorders were found for ENSG00000271100 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000271100 Gene

Publications for ENSG00000271100 Gene

No publications were found for ENSG00000271100 Gene.

No data available for Mastermind for ENSG00000271100 Gene

Products for ENSG00000271100 Gene

Sources for ENSG00000271100 Gene