Aliases for ENSG00000270891 Gene

Aliases for ENSG00000270891 Gene

  • Coiled-Coil Domain Containing 93 (CCDC93) Pseudogene 5
  • AC012507.2 5

External Ids for ENSG00000270891 Gene

Previous GeneCards Identifiers for ENSG00000270891 Gene

  • GC02P231701

Summaries for ENSG00000270891 Gene

GeneCards Summary for ENSG00000270891 Gene

ENSG00000270891 is a Pseudogene.

Additional gene information for ENSG00000270891 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000270891 Gene

Genomics for ENSG00000270891 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000270891 Gene

Promoters and enhancers for ENSG00000270891 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J230792 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -41.3 -41308 7.2 CTCF JUND FOS REST POLR2A RAD21 TRIM22 NR2F2 ZNF316 SMC3 CAB39 SP100 RNU6-268P SPATA3 SPATA3-AS1 SP140L RF00026-621 lnc-CAB39-2 ENSG00000270891
GH02J230773 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 0.2 -60.2 -60162 6.8 JUND FOS POLR2A JUN MEF2A BCL11A NCOR1 WT1 CBFB MAFF CAB39 RNU6-268P LINC01907 RF00026-621 ENSG00000270891 lnc-CAB39-2
GH02J230824 Enhancer 0.7 ENCODE 0.4 -12.2 -12218 0.2 CTCF REST RAD21 ZBTB7A TRIM22 SMC3 IRF1 CEBPG CEBPB ZNF335 ENSG00000270891 lnc-CAB39-2 RF00026-621 RNU6-268P
GH02J230755 Promoter/Enhancer 1.1 Ensembl ENCODE 0.2 -79.3 -79255 4.7 ZNF623 ZNF510 RUNX1 ZNF266 FOXA2 CBFB CEBPG FOS CEBPB ZBTB11 NCL FBXO36 SLC16A14 CAB39 ENSG00000235419 TEX44 TRIP12 RNU6-451P RF00026-621 RNU6-268P
GH02J230784 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.2 -50.7 -50709 4 MITF HLF SRF POLR2A MYC RNU6-268P RNU6-451P CAB39 RF00026-621 ENSG00000270891 lnc-CAB39-2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000270891 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000270891 Gene

Genomic Locations for ENSG00000270891 Gene
chr2:230,836,909-230,837,385
(GRCh38/hg38)
Size:
477 bases
Orientation:
Plus strand
chr2:231,701,624-231,702,100
(GRCh37/hg19)
Size:
477 bases
Orientation:
Plus strand

Genomic View for ENSG00000270891 Gene

Genes around ENSG00000270891 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000270891 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000270891 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000270891 Gene

Proteins for ENSG00000270891 Gene

Post-translational modifications for ENSG00000270891 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000270891 Gene

Domains & Families for ENSG00000270891 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000270891 Gene

Function for ENSG00000270891 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000270891 Gene

Localization for ENSG00000270891 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000270891 Gene

Pathways & Interactions for ENSG00000270891 Gene

PathCards logo

SuperPathways for ENSG00000270891 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000270891 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000270891 Gene

Drugs & Compounds for ENSG00000270891 Gene

No Compound Related Data Available

Transcripts for ENSG00000270891 Gene

mRNA/cDNA for ENSG00000270891 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000270891 Gene

No ASD Table

Relevant External Links for ENSG00000270891 Gene

GeneLoc Exon Structure for
ENSG00000270891

Expression for ENSG00000270891 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000270891 Gene

genes like me logo Genes that share expression patterns with ENSG00000270891: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000270891 Gene

Orthologs for ENSG00000270891 Gene

Evolution for ENSG00000270891 Gene

ENSEMBL:
Gene Tree for ENSG00000270891 (if available)
TreeFam:
Gene Tree for ENSG00000270891 (if available)

No data available for Orthologs for ENSG00000270891 Gene

Paralogs for ENSG00000270891 Gene

No data available for Paralogs for ENSG00000270891 Gene

Variants for ENSG00000270891 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000270891 Gene

Disorders for ENSG00000270891 Gene

No disorders were found for ENSG00000270891 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000270891 Gene

Publications for ENSG00000270891 Gene

No publications were found for ENSG00000270891 Gene.

No data available for Mastermind for ENSG00000270891 Gene

Products for ENSG00000270891 Gene

Sources for ENSG00000270891 Gene