Aliases for ENSG00000270487 Gene

Subcategory (RNA class) for ENSG00000270487 Gene

lncRNA

Number of RNA Genes sources:

0 / 14

Aliases for ENSG00000270487 Gene

  • Novel Transcript, Antisense To ARID1B 5
  • AL355297.2 5

External Ids for ENSG00000270487 Gene

Previous GeneCards Identifiers for ENSG00000270487 Gene

  • GC06M157103

Summaries for ENSG00000270487 Gene

GeneCards Summary for ENSG00000270487 Gene

ENSG00000270487 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000270487 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000270487 Gene

Genomics for ENSG00000270487 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000270487 Gene

Promoters and enhancers for ENSG00000270487 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J156775 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 +0.5 492 8.5 FOXK2 HNRNPK SIN3A NRF1 POLR2G SP1 GTF2E2 PHF8 ZFX ZIC2 ARID1B ENSG00000271551 ENSG00000270487 MIR4466 LOC100420839 SNX9 5EW4_A-046 NONHSAG045232.2 RF00017-5897
GH06J156790 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 -11.0 -11018 1.1 MYC USF1 ZNF639 TRIM28 TOE1 TRIM22 MXI1 ZNF341 BCL11A ZNF316 ENSG00000270487 ARID1B lnc-ZDHHC14-5 RF00017-5897
GH06J156795 Promoter/Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -15.4 -15446 0.6 REST MXI1 ZBTB17 ZMIZ1 ZBTB33 YY1 MLLT1 POLR2A ARID1B ENSG00000270487 lnc-ZDHHC14-5 RF00017-5897
GH06J156794 Enhancer 0.8 ENCODE dbSUPER 0.4 -14.6 -14617 0.2 RELA ESR1 NBN JUND POU2F2 EBF1 IKZF1 POLR2A NR2F1 RAD21 ENSG00000270487 ARID1B lnc-ZDHHC14-5 RF00017-5897
GH06J156808 Enhancer 0.9 ENCODE dbSUPER 0.3 -28.7 -28663 1.7 ZSCAN5C USF1 TRIM28 USF2 MYC MXI1 MAX ZNF592 E2F6 MNT ARID1B lnc-ZDHHC14-5 ENSG00000270487 RF00017-5897
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000270487 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000270487 Gene

Genomic Locations for ENSG00000270487 Gene
chr6:156,780,327-156,780,455
(GRCh38/hg38)
Size:
129 bases
Orientation:
Minus strand
chr6:157,101,461-157,101,589
(GRCh37/hg19)
Size:
129 bases
Orientation:
Minus strand

Genomic View for ENSG00000270487 Gene

Genes around ENSG00000270487 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000270487 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000270487 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000270487 Gene

Proteins for ENSG00000270487 Gene

Post-translational modifications for ENSG00000270487 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000270487 Gene

Domains & Families for ENSG00000270487 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000270487 Gene

Function for ENSG00000270487 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000270487 Gene

Localization for ENSG00000270487 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000270487 Gene

Pathways & Interactions for ENSG00000270487 Gene

PathCards logo

SuperPathways for ENSG00000270487 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000270487 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000270487 Gene

Drugs & Compounds for ENSG00000270487 Gene

No Compound Related Data Available

Transcripts for ENSG00000270487 Gene

mRNA/cDNA for ENSG00000270487 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000270487 Gene

No ASD Table

Relevant External Links for ENSG00000270487 Gene

GeneLoc Exon Structure for
ENSG00000270487

Expression for ENSG00000270487 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000270487 Gene

genes like me logo Genes that share expression patterns with ENSG00000270487: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000270487 Gene

Orthologs for ENSG00000270487 Gene

Evolution for ENSG00000270487 Gene

ENSEMBL:
Gene Tree for ENSG00000270487 (if available)
TreeFam:
Gene Tree for ENSG00000270487 (if available)

No data available for Orthologs for ENSG00000270487 Gene

Paralogs for ENSG00000270487 Gene

No data available for Paralogs for ENSG00000270487 Gene

Variants for ENSG00000270487 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000270487 Gene

Disorders for ENSG00000270487 Gene

No disorders were found for ENSG00000270487 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000270487 Gene

Publications for ENSG00000270487 Gene

No publications were found for ENSG00000270487 Gene.

No data available for Mastermind for ENSG00000270487 Gene

Products for ENSG00000270487 Gene

Sources for ENSG00000270487 Gene