Aliases for ENSG00000270212 Gene

Subcategory (RNA class) for ENSG00000270212 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000270212 Gene

  • Novel Transcript 5
  • NONHSAG025482.2 91
  • HSALNG0125422 164
  • Lnc-CEBPA-2 165
  • AC008738.6 5

External Ids for ENSG00000270212 Gene

Previous GeneCards Identifiers for ENSG00000270212 Gene

  • GC19M033774

Summaries for ENSG00000270212 Gene

GeneCards Summary for ENSG00000270212 Gene

ENSG00000270212 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000270212 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000270212 Gene

Genomics for ENSG00000270212 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000270212 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J033288 Promoter/Enhancer 0.8 Ensembl ENCODE dbSUPER 600.7 -1.4 -1422 0.7 YY2 ZNF121 ENSG00000270212 CEBPG CEBPA-DT ENSG00000267580 CEBPA SLC7A10
GH19J033285 Enhancer 0.8 ENCODE dbSUPER 600.7 +0.0 16 0.6 SP1 FOXP1 KLF8 NR2F1 SPI1 SMAD4 HNF4A ZSCAN26 RXRA KDM1A ENSG00000270212 CEBPG CEP89 piR-44621 CEBPA SLC7A10
GH19J033290 Enhancer 0.6 ENCODE dbSUPER 600.7 -0.4 -361 0.1 FOXA2 KLF8 TFAP4 ZSCAN26 MAX REST ENSG00000270212 CEBPG CEP89 ENSG00000267580 CEBPA SLC7A10
GH19J033289 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -6.6 -6600 6.5 ZNF221 HNRNPL GATAD2A ZBTB33 PRDM10 ZNF629 ZNF692 RCOR2 ZNF7 PRDM1 GPATCH1 LSM14A CEP89 GARRE1 ZNF507 FAAP24 CEBPG WDR88 CHST8 CEBPA-DT
GH19J033287 Enhancer 0.7 FANTOM5 ENCODE dbSUPER 0.7 -2.2 -2238 0.5 HIC1 YY2 ZNF121 CEBPG ENSG00000270212 CEBPA ENSG00000267580 SLC7A10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000270212 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000270212 Gene

Genomic Locations for ENSG00000270212 Gene
chr19:33,283,978-33,285,739
(GRCh38/hg38)
Size:
1,762 bases
Orientation:
Minus strand
chr19:33,774,884-33,776,645
(GRCh37/hg19)
Size:
1,762 bases
Orientation:
Minus strand

Genomic View for ENSG00000270212 Gene

Genes around ENSG00000270212 on UCSC Golden Path with GeneCards custom track
ENSG00000270212 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000270212 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000270212 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000270212 Gene

Proteins for ENSG00000270212 Gene

Post-translational modifications for ENSG00000270212 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000270212 Gene

Domains & Families for ENSG00000270212 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000270212 Gene

Function for ENSG00000270212 Gene

Phenotypes From GWAS Catalog for ENSG00000270212 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000270212 Gene

Localization for ENSG00000270212 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000270212 Gene

Pathways & Interactions for ENSG00000270212 Gene

PathCards logo

SuperPathways for ENSG00000270212 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000270212 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000270212 Gene

Drugs & Compounds for ENSG00000270212 Gene

No Compound Related Data Available

Transcripts for ENSG00000270212 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000270212 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00000EF173_9606 lncRNA 569 4

Ensembl: ENST00000604605 (view in UCSC) ,

LncBook: HSALNT0258547,

LNCipedia: lnc-CEBPA-2:1,

NONCODE: NONHSAT064242.2,

ENSG00000270212 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000270212 Gene

No ASD Table

Relevant External Links for ENSG00000270212 Gene

GeneLoc Exon Structure for
ENSG00000270212

No data available for mRNA/cDNA for ENSG00000270212 Gene

Expression for ENSG00000270212 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000270212 Gene

genes like me logo Genes that share expression patterns with ENSG00000270212: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000270212 Gene

Orthologs for ENSG00000270212 Gene

Evolution for ENSG00000270212 Gene

ENSEMBL:
Gene Tree for ENSG00000270212 (if available)
TreeFam:
Gene Tree for ENSG00000270212 (if available)

No data available for Orthologs for ENSG00000270212 Gene

Paralogs for ENSG00000270212 Gene

No data available for Paralogs for ENSG00000270212 Gene

Variants for ENSG00000270212 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000270212 Gene

Disorders for ENSG00000270212 Gene

No disorders were found for ENSG00000270212 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000270212 Gene

Publications for ENSG00000270212 Gene

No publications were found for ENSG00000270212 Gene.

No data available for Mastermind for ENSG00000270212 Gene

Products for ENSG00000270212 Gene

Sources for ENSG00000270212 Gene