Aliases for ENSG00000270179 Gene

Data sources for ENSG00000270179 Gene:

Subcategory (RNA class) for ENSG00000270179 Gene

lncRNA

Aliases for ENSG00000270179 Gene

External Ids for ENSG00000270179 Gene

Previous GeneCards Identifiers for ENSG00000270179 Gene

  • GC11P113239

Summaries for ENSG00000270179 Gene

GeneCards Summary for ENSG00000270179 Gene

ENSG00000270179 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000270179 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000270179 Gene

Genomics for ENSG00000270179 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000270179 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J113370 Enhancer 0.5 Ensembl 250.7 +1.9 1923 0.8 ZNF316 MAFG RCOR1 GATA2 CBFA2T2 CBFA2T3 NFIC EMSY ENSG00000270179 HSALNG0087241 HSALNG0087243 ANKK1 TTC12
GH11J112960 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 23.3 -405.8 -405798 3.8 ZSCAN16 CHD2 ZBTB10 FEZF1 ZEB1 ZIC2 ZNF610 SIN3A ZNF639 KLF7 NCAM1 LOC101928847 ENSG00000270179 NKAPD1 ZW10 TTC12
GH11J113872 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 24.1 +506.3 506315 4.8 TBP FEZF1 MNT SMAD5 IRF2 HES1 ZFP64 MBD2 POLR2A BHLHE40 USP28 lnc-HTR3B-3 ENSG00000270179 RBM7 NXPE4 TTC12 ZW10 NXPE1 LRRC37A13P RF00066-041
GH11J113367 Enhancer 0.2 Ensembl 250.7 -0.5 -477 0.4 ENSG00000270179 TTC12 HSALNG0087240 HSALNG0087241 ANKK1
GH11J114214 Enhancer 1.8 UCNEbase FANTOM5 Ensembl ENCODE dbSUPER 10.7 +849.4 849447 6.2 TBP FEZF1 IKZF1 HES1 MBD2 ARNT ZNF395 NFATC3 VEZF1 NBN RBM7 ZW10 NNMT NXPE4 NXPE1 TTC12 ENSG00000270179 ZBTB16 lnc-NNMT-3 piR-34504
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000270179 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000270179 Gene

Latest Assembly
chr11:113,368,478-113,369,117
(GRCh38/hg38)
Size:
640 bases
Orientation:
Plus strand

Previous Assembly
chr11:113,239,200-113,239,839
(GRCh37/hg19 by Ensembl)
Size:
640 bases
Orientation:
Plus strand

Genomic View for ENSG00000270179 Gene

Genes around ENSG00000270179 on UCSC Golden Path with GeneCards custom track
ENSG00000270179 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000270179 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000270179 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000270179 Gene

Proteins for ENSG00000270179 Gene

Post-translational modifications for ENSG00000270179 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000270179 Gene

Domains & Families for ENSG00000270179 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000270179 Gene

Function for ENSG00000270179 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000270179 Gene

Localization for ENSG00000270179 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000270179 Gene

Pathways & Interactions for ENSG00000270179 Gene

PathCards logo

SuperPathways for ENSG00000270179 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000270179 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000270179 Gene

Drugs & Compounds for ENSG00000270179 Gene

No Compound Related Data Available

Transcripts for ENSG00000270179 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000270179 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001E5863_9606 lncRNA 640 2

Ensembl: ENST00000602900 (view in UCSC) ,

NONCODE: NONHSAT024245.2,

URS0001BD09A8_9606 lncRNA 640 1

LncBook: HSALNT0181298,

ENSG00000270179 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000270179 Gene

No ASD Table

Relevant External Links for ENSG00000270179 Gene

GeneLoc Exon Structure for
ENSG00000270179

No data available for mRNA/cDNA for ENSG00000270179 Gene

Expression for ENSG00000270179 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000270179 Gene

genes like me logo Genes that share expression patterns with ENSG00000270179: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000270179 Gene

Orthologs for ENSG00000270179 Gene

Evolution for ENSG00000270179 Gene

ENSEMBL:
Gene Tree for ENSG00000270179 (if available)
TreeFam:
Gene Tree for ENSG00000270179 (if available)

No data available for Orthologs for ENSG00000270179 Gene

Paralogs for ENSG00000270179 Gene

No data available for Paralogs for ENSG00000270179 Gene

Variants for ENSG00000270179 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000270179 Gene

Disorders for ENSG00000270179 Gene

No disorders were found for ENSG00000270179 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000270179 Gene

Publications for ENSG00000270179 Gene

No publications were found for ENSG00000270179 Gene.

No data available for Mastermind for ENSG00000270179 Gene

Products for ENSG00000270179 Gene

Sources for ENSG00000270179 Gene