Aliases for ENSG00000270179 Gene

Subcategory (RNA class) for ENSG00000270179 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for ENSG00000270179 Gene

  • Novel Transcript 5
  • NONHSAG009643.2 91
  • AP002840.2 5

External Ids for ENSG00000270179 Gene

Previous GeneCards Identifiers for ENSG00000270179 Gene

  • GC11P113239

Summaries for ENSG00000270179 Gene

GeneCards Summary for ENSG00000270179 Gene

ENSG00000270179 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000270179 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000270179 Gene

Genomics for ENSG00000270179 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000270179 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J113367 Enhancer 0.2 Ensembl 600.7 -0.5 -477 0.4 ENSG00000270179 TTC12 ANKK1 HSALNG0087235
GH11J113370 Enhancer 0.2 Ensembl 600.7 +1.9 1923 0.4 ENSG00000270179 ANKK1 lnc-DRD2-5 TTC12
GH11J112960 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 23.3 -405.6 -405599 4.2 ZNF221 PRDM10 ZNF629 KDM1A ZNF692 ZNF174 PRDM1 ZIC2 ZSCAN4 PKNOX1 NCAM1 LOC101928847 ENSG00000270179 NKAPD1 ZW10 TTC12 NCAM1-AS1
GH11J114152 Promoter/Enhancer 2.3 UCNEbase FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 18 +795.1 795145 22.1 ZNF221 CREB1 GATAD2A PRDM10 REST ZNF629 LEF1 IKZF1 ZNF692 ZNF174 ENSG00000270179 ZBTB16 NNMT TTC12 ZW10 CLDN25 ENSG00000286463 HSALNG0087292 LOC101928875 MN298678-016
GH11J113872 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 11.7 +506.3 506323 4.8 GATAD2A PRDM10 ZNF629 TFE3 LEF1 ZNF692 POLR2A JUND FOXA1 LARP7 USP28 lnc-HTR3B-3 ENSG00000270179 ZW10 RBM7 NXPE4 LRRC37A13P RF00066-041 lnc-USP28-3 CLDN25
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000270179 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000270179 Gene

Genomic Locations for ENSG00000270179 Gene
chr11:113,368,478-113,369,117
(GRCh38/hg38)
Size:
640 bases
Orientation:
Plus strand
chr11:113,239,200-113,239,839
(GRCh37/hg19)
Size:
640 bases
Orientation:
Plus strand

Genomic View for ENSG00000270179 Gene

Genes around ENSG00000270179 on UCSC Golden Path with GeneCards custom track
ENSG00000270179 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000270179 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000270179 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000270179 Gene

Proteins for ENSG00000270179 Gene

Post-translational modifications for ENSG00000270179 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000270179 Gene

Domains & Families for ENSG00000270179 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000270179 Gene

Function for ENSG00000270179 Gene

Phenotypes From GWAS Catalog for ENSG00000270179 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000270179 Gene

Localization for ENSG00000270179 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000270179 Gene

Pathways & Interactions for ENSG00000270179 Gene

PathCards logo

SuperPathways for ENSG00000270179 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000270179 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000270179 Gene

Drugs & Compounds for ENSG00000270179 Gene

No Compound Related Data Available

Transcripts for ENSG00000270179 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000270179 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001E5863_9606 lncRNA 640 2

Ensembl: ENST00000602900 (view in UCSC) ,

NONCODE: NONHSAT024245.2,

ENSG00000270179 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000270179 Gene

No ASD Table

Relevant External Links for ENSG00000270179 Gene

GeneLoc Exon Structure for
ENSG00000270179

No data available for mRNA/cDNA for ENSG00000270179 Gene

Expression for ENSG00000270179 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000270179 Gene

genes like me logo Genes that share expression patterns with ENSG00000270179: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000270179 Gene

Orthologs for ENSG00000270179 Gene

Evolution for ENSG00000270179 Gene

ENSEMBL:
Gene Tree for ENSG00000270179 (if available)
TreeFam:
Gene Tree for ENSG00000270179 (if available)

No data available for Orthologs for ENSG00000270179 Gene

Paralogs for ENSG00000270179 Gene

No data available for Paralogs for ENSG00000270179 Gene

Variants for ENSG00000270179 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000270179 Gene

Disorders for ENSG00000270179 Gene

No disorders were found for ENSG00000270179 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000270179 Gene

Publications for ENSG00000270179 Gene

No publications were found for ENSG00000270179 Gene.

No data available for Mastermind for ENSG00000270179 Gene

Products for ENSG00000270179 Gene

Sources for ENSG00000270179 Gene